Streptococcus dysgalactiae subsp. equisimilis ATCC 12394: SDE12394_09650
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Entry
SDE12394_09650 CDS
T02017
Name
(GenBank) Putative CMP-binding factor
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sdg
Streptococcus dysgalactiae subsp. equisimilis ATCC 12394
Brite
KEGG Orthology (KO) [BR:
sdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdg03019
]
SDE12394_09650
Messenger RNA biogenesis [BR:
sdg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SDE12394_09650
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ADX25354
LinkDB
All DBs
Position
complement(1904075..1905013)
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AA seq
312 aa
AA seq
DB search
MKINQMKKDQLFEGFYLIKSAEVRKTRAGKDFINLTFQDDTGEISGNLWDAQPYNVEEFT
AGKIVFMKGRREVYNGTPQVNQITLRNVRPGEPNDPKDFKEKAPVSVTEVRDYLEQMLFK
IENATWQRIVRALYRKYDKEFYTYPAAKTNHHAFESGLAYHTATMIRLADSIGDIYPELD
KSLLFAGIMLHDLAKVLELTGPDNTEYTVRGNLIGHIALINEEITKVIAELNIDDSKEEV
IVLRHVILSHHGQLEYGSPVRPRIMEAEIIHMIDNIDANMMMMTTALNRVSEGEMTNRIF
AMDNRSFYKPKY
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaccaaatgaaaaaagaccagctttttgaagggttctacctcattaagtcg
gcagaagttcgtaaaacaagagctggaaaagattttattaaccttacctttcaggatgat
actggcgaaatttcaggaaatctttgggatgcccaaccttataatgtggaagaattcact
gctggtaaaattgtctttatgaaagggcgccgagaggtttataatggtacccctcaggtt
aatcaaatcaccttacgaaatgttcgcccaggggagcccaatgatccaaaagacttcaaa
gaaaaggcacctgtcagtgtgacagaagtacgtgactatttggaacagatgctctttaaa
attgaaaatgcaacgtggcaacgaattgttagagccctctaccgtaaatatgataaagaa
ttttacacttacccagcggctaaaaccaatcatcatgcctttgaatcggggcttgcctat
cataccgcgacaatgataagattggcggatagtatcggtgacatttatcctgaattagat
aaaagtttactttttgcgggtattatgctccatgatcttgcaaaagtattggaattgaca
ggaccagataatacagaatacacggttcgtggtaacctgattggccatattgccttgatt
aacgaagaaattactaaagtgattgctgagctcaacattgatgacagtaaggaggaagtg
attgttcttcgtcatgttattttgagtcaccacggccaattagaatacggtagtcccgtt
cgtcctcgtattatggaagctgaaattattcacatgattgataacattgatgccaacatg
atgatgatgaccacggcacttaaccgcgttagcgagggggaaatgaccaatcgtattttt
gctatggataatcgttctttctataaacctaaatactga
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