Sphingomonas daechungensis: H9L15_00380
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Entry
H9L15_00380 CDS
T07072
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sdh
Sphingomonas daechungensis
Pathway
sdh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H9L15_00380 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdh03400
]
H9L15_00380 (recO)
DNA repair and recombination proteins [BR:
sdh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H9L15_00380 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H9L15_00380 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
QNP43368
UniProt:
A0ABX6T6U2
LinkDB
All DBs
Position
complement(64549..65283)
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AA seq
244 aa
AA seq
DB search
MNIDTPAIVCALRTHAEHGAVVRLMTPKDGLQAAYVRGARGRRMRPVLVPGNLVQARLRS
RTEEQLAHAEVELEHSRAPLITEPLPAAAIDWVTALTAAALPEGQPYPRLYDALDALLAL
IEAAPSALGWSSLLVRYELLLLAELGFGLDLETCAVTGSNDGLVAVSPGSGRAVSAAEAE
PYAGKLLILPRFVREGGPASWEDIRDGLVLSGHFLSRDILTGRVSGLGEARSRLVGRILR
AGGI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgaacatcgatacgcctgccatcgtctgcgcattgagaacgcatgcggagcatggcgcg
gtcgttcggctgatgacgccgaaggatggattgcaggcagcatacgtgcgcggcgctcgc
ggccggcggatgcggccggtgctggtgcccgggaacctggtacaggcgcggctgcggtcg
cggaccgaggaacagctcgcccatgccgaagtggaattggaacacagccgcgcaccactg
atcaccgaaccgcttccggcggcggcgatcgactgggttacggcgctgaccgcagccgcg
cttcccgagggacagccctatccgcgcctctacgatgcgctggacgcccttcttgcgctg
atcgaagccgctccttccgcgcttggctggtcaagtctgctggtccgctacgagctgctc
ttgctggcggaattggggttcggcctcgatcttgagacttgcgcggtaaccgggtcgaac
gacggcctcgtcgcggtcagtccaggttcggggcgggcggtcagcgcggccgaggcagag
ccgtatgcgggcaagctgctcatcttgccaagatttgttcgtgaaggcggtccggcgagc
tgggaggacatccgcgacgggcttgtgcttagcggtcatttcctgtcccgcgacatcctt
acgggccgtgtttcgggtctgggggaagcgcgatcgagactggtcgggcgaattcttcgc
gccggcgggatctag
DBGET
integrated database retrieval system
