Sphingomonas daechungensis: H9L15_01430
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Entry
H9L15_01430 CDS
T07072
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sdh
Sphingomonas daechungensis
Pathway
sdh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
H9L15_01430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdh03400
]
H9L15_01430
Enzymes [BR:
sdh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
H9L15_01430
DNA repair and recombination proteins [BR:
sdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
H9L15_01430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF5667
CCDC93_CC
Motif
Other DBs
NCBI-ProteinID:
QNP43491
LinkDB
All DBs
Position
complement(280178..280423)
Genome browser
AA seq
81 aa
AA seq
DB search
MDAPEPQNELSFEAALARLEEIVRLLERGEAPLDQSIELYQEGDRLRRHCEARLKAAQER
IEQIAFGVDGRPSGVTPFDAG
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaccggaaccgcagaacgaattgagcttcgaggcagcgcttgcacggctcgag
gaaatcgtgcgcctgctggagcgcggtgaggcgccgctcgaccagtccatcgagctctac
caggaaggggatcgtctccgccgccattgcgaggctcgcctgaaggctgcgcaggagcgg
atcgagcagatcgcgttcggggttgacggccgtccgtccggagtcacgccgttcgatgcc
ggttga
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