Sphingomonas daechungensis: H9L15_04185
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Entry
H9L15_04185 CDS
T07072
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sdh
Sphingomonas daechungensis
Brite
KEGG Orthology (KO) [BR:
sdh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdh01002
]
H9L15_04185
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdh01011
]
H9L15_04185
Peptidases and inhibitors [BR:
sdh01002
]
Cysteine peptidases
Family C82
H9L15_04185
Peptidoglycan biosynthesis and degradation proteins [BR:
sdh01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
H9L15_04185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QNP43844
LinkDB
All DBs
Position
complement(796812..798089)
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AA seq
425 aa
AA seq
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MRNTLALIIGAAAVLGTAPAMAAPRGDEPVAVPRAIKQGIDFVYVDPDMSNVARRHQRPQ
NWLQRLFSMDFSAGRSGAPNVLFGQLGRGLQQYQATYGRLPQIKIPAGPVLKRGSTGKRV
QLLRQRLGLYPQGGYDDQLFQAVASYQTVHGIGPADGIAGKGTIASLNRGSRYYEQRIAI
NMERAFRLPSVRTFNRYVVVDSGSAEAYLFDRDRVVDGMKVVVGAPKTKTPMIAVIMRNA
KANPYWNVPPELVRSLTAKKVQEMGLSYFKSFHYEVLRDWGPNAPVIDPKTVNWKAIASG
KQEPTIHVRQLPGPWNSMRNMKFEMPNDYGIYLHDTPHDELFAKNDRWLSNGCVRLQDYR
RFATWVFGRVPQPSTQYEQTFPLPRPVPIYLTYLTVAPSNNGVVFRPDPYGWDALAMSQM
FAGKA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacacgcttgctttgatcatcggtgcggctgccgtcctgggcactgcacccgct
atggcggctccccgcggcgacgagcccgtcgcagtgccgcgcgcgatcaagcagggcatc
gacttcgtctacgtcgatccggacatgagcaatgtcgcgaggcgccaccagcggccgcag
aattggctgcagcgactgttcagcatggatttctccgccggcaggtccggcgctccgaat
gtcctgttcggtcagcttgggcgcggattgcagcagtatcaggcgacatatggccgcctt
ccgcagatcaagatcccggccggcccggtactgaagcgtggctcgactggcaaaagggtt
cagctgcttcgccagcggctcgggctctaccctcagggcggttatgacgatcagctcttc
caggccgtcgcgagctatcagactgtgcacggaattggtcccgcggacggcattgccggc
aagggaacgatcgcttcgctcaaccgcggctcgcgctattacgagcagcggattgccatc
aacatggagcgtgcattccggcttccatccgtccgcacgttcaaccgctacgtcgtcgtc
gattccggctcagccgaagcttaccttttcgatcgcgaccgcgtcgtcgacggcatgaag
gtcgtcgtcggcgcgccgaagacgaagacgccgatgatcgcggtgatcatgcgcaatgcg
aaggccaatccttactggaacgtgccgcccgagctggttcgcagcctgaccgcaaagaag
gtccaggagatgggcctctcctacttcaagagcttccattacgaagtgctgcgcgactgg
ggtcccaacgctcccgtgatcgatccgaagacggtcaactggaaggcgatcgcgtcgggc
aagcaggagccgacaatccacgtccggcagcttcctggtccgtggaattccatgcgcaac
atgaagttcgaaatgcccaacgattacggcatctaccttcacgatacaccgcatgacgaa
ctgttcgcgaagaatgaccgctggctcagcaacgggtgcgtgcgtctgcaggactatcgc
cgcttcgcgacctgggtgttcggccgtgtccctcagccgtcaacgcagtacgagcagacc
ttcccgttgccgcggccggtgccgatctacctgacttatctgactgtcgcgccgagcaac
aatggcgtcgtctttcgtcccgacccttacggctgggatgcgctcgcgatgtcgcagatg
ttcgcaggcaaggcgtag
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