Sphingomonas daechungensis: H9L15_04500
Help
Entry
H9L15_04500 CDS
T07072
Name
(GenBank) efflux RND transporter permease subunit
Organism
sdh
Sphingomonas daechungensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QNP43890
LinkDB
All DBs
Position
complement(857241..860420)
Genome browser
AA seq
1059 aa
AA seq
DB search
MQFSHFFIRRPIFAGVIAIIITIVGAFAYFGLPVSQFPNVVPPTVTVSTFYPGASAETVA
DTVAAPIEQQINGVDNMLYQSSQSTGDGRVTITVTFKLGTDLDTAQVLVQNRVALATPSL
PEDVRRQGVVVRKTSPSWLMAVNVLSPDGSLDRGYVSNYALTQLKDRLSRVDGIGDVSIF
GARDYAMRVWIDPGRASTLGLTAGEVVSALRSQNVQVAAGTVGQPPFDTGAAQQLNVETQ
GRFKTADEFANIIIRTDSASGAITRLRDVARVELGAEDYGVNAYLSGKDSVILGITQRPG
TNALAAAEGVKAQLAEASKTFPKGLEYRIIWNPTEFISKSMTAVQETLLEALILVVLVII
VFLQSWRAAVIPIIAIPVSLIGSFAVLAALGYSLNTLSMFGLVLAIGIVVDDAIVVVENV
ERNLEHGLSPKEAAHQSMDEVSTALVAIVLVLCAVFVPVTFLTGITGEFYRQFAVTIAAS
TVISLLLSLTLSPALAARLLKPKSKHRAESGIMGFVHRAGDRFNTGFGKLSNWYRSFTRR
VLRAPKRALATYAGLVGLTVGVFWYTPGGFIPAQDQGYALAAIQLPPGSSIERTDEVLKK
AVAKLLKVPGVDQAVMFSGFDGASGTQASNAGAAYVTFKPFEERAGTDRTELNIENDMRA
ALADMDEAFVFVIPPPVIQGVGNGGGYRMIVQDRSGAGYQALEQAAQQLIGQAHQEKGLA
NVFTLFNTATPRVFADVDRAKADMLGVPTERVNETLQVYLGSAYVNDFNLLGRTFRVTAQ
ADAQYRDDPADIAQLKTRSNSGAMVPIGTVATFQDKTGPYRVTRFNLFPAVEVDGDTAPG
YSTGQSLKTMERLASSLPQGFATEWTDIAFQQKLAGNIAAVIFALSVVFVFLVLAAQFES
LLLPLAIILIVPMTLLAAMTGVNLRGLDNNILTQIGLIVLIALAAKNAILIVEFAKQAEE
RGLSAIDAAVEAAGSRLRPILMTSFAFVLGTLPLVLATGPGWELRQALGTAVFFGMIGVT
AFGLIFTPVFYVATRTLGERLARGRGRPSEQQPMLLPAE
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcagtcacttcttcatccgacggccgatctttgccggcgtcatcgcgatcatc
atcacgatcgtcggtgcgttcgcttacttcgggctgcccgtgtcgcagttcccgaacgtc
gtcccgccaacggtcacggtcagcactttctatcccggtgcgtccgccgaaaccgtcgcg
gacaccgtcgctgcgccgatcgaacagcagatcaacggcgtcgacaacatgctctatcag
tcgtcgcagtcgaccggtgacgggcgcgtcacgatcaccgttacgttcaagctcggcacc
gacctcgataccgcgcaagtgctcgttcagaaccgcgtcgccctcgccacgccgagcttg
cctgaggacgtgcgccggcagggtgtcgtcgttcgcaagacctcgccgtcatggctgatg
gcggtcaacgttctgtcgcccgacggttcgctcgatcgcggctacgtgtcgaactacgcg
ttgacgcagctcaaggaccgactgtcgcgcgtcgacggtattggcgacgtctcaatcttt
ggcgcccgcgattatgcgatgcgcgtgtggatcgatccgggccgggcttcgacgcttggc
ctgaccgccggcgaggtcgtgagtgcgctgcgcagccagaacgtccaggttgcggccggc
accgtgggccagccgcccttcgacacgggcgctgcgcaacagcttaacgtcgagacccag
ggccgcttcaagacggccgacgagttcgccaacatcatcatcaggaccgattcggcatct
ggcgcaatcacgcgtcttcgcgatgtcgcacgcgtcgagctcggtgccgaggattacggg
gtcaacgcctacctctcgggcaaggactcggtgatcctcggcatcacccaacggccggga
accaacgcgctcgccgctgcggagggcgtcaaggcccagctcgctgaggcgtccaagact
ttcccgaagggcctcgaatatcgcatcatctggaacccgaccgagttcatcagcaagtcg
atgacggcggtgcaggaaacgctcctcgaagcgcttatcctcgtcgttcttgtgatcatc
gtcttcctgcaaagctggcgtgccgcggttatcccgatcatcgccatcccggtgtcgctg
atcggctcgttcgcagtgcttgccgcgctcggctactcgctcaacacattgtcgatgttc
ggcctggtgctggcgatcggcattgtggtggatgatgccatcgtcgtcgtcgaaaatgtc
gaacgcaacctcgaacacggcctcagtccaaaggaagcggcgcatcagtcgatggacgag
gtttcgaccgcgctcgtcgccatcgtcctcgtgctttgcgcggtgttcgtcccggtcacg
ttcctcaccggaatcacgggcgaattctatcgccagttcgcggtgacgattgcagcgtcg
acggtcatctcgctgctgctttcgctgacattgtctcccgcacttgcggcgcggctgctg
aagccgaagagcaagcatcgcgcggagtcgggtatcatgggcttcgtccatcgggcgggc
gatcgctttaacaccggcttcggcaagctcagcaattggtacaggagctttacgcgccgg
gtcctccgggcgccgaagcgggctctggcaacctatgccgggctcgtcggtctgaccgtc
ggagtgttctggtacacgccgggcgggttcatccccgcgcaggaccagggctacgcgctt
gccgcgatccaacttccgccgggaagctcgatcgagcgcaccgacgaagtcttgaagaag
gctgtggccaagctgctgaaggtgcccggagtcgaccaggcggtgatgttctccggtttc
gacggagcgtcggggacgcaggcttccaacgccggcgcagcctacgtcaccttcaagccg
ttcgaggagcgggcgggtactgaccgcaccgagcttaatatcgagaacgacatgcgcgct
gcgctcgccgacatggacgaagcgttcgtgttcgtcatcccgccgcccgtcatccaaggc
gtcggcaacggcggcggctatcgcatgatcgtgcaggatcgcagcggcgccggttaccag
gctctcgagcaggctgcccagcagctgatcggccaggcccaccaagagaaaggtctcgcc
aacgtcttcaccttgttcaacaccgcgaccccgcgcgtctttgccgacgtcgaccgcgcc
aaggcggacatgctcggcgtaccgacggagcgtgtgaacgagacgcttcaggtctatctc
ggctccgcctacgtcaacgacttcaacctgctcggccggaccttccgggtaacggcgcag
gcggatgctcagtatcgcgacgatccagccgacatcgcccagctcaagacccgctcaaac
agcggcgccatggtgccgatcggaacggtcgcgacgttccaggacaagacgggcccgtat
cgcgtcacgcgcttcaatctcttccctgcggtcgaggtcgatggcgacaccgcgcccggt
tattcgaccggccaatcgctgaaaacgatggaaaggctcgcgtcgagcttgccgcagggc
ttcgcgaccgagtggaccgatattgccttccaacagaagcttgccggcaacatcgccgcg
gtcatcttcgccttgtcggtggtgttcgtcttcctcgtgctcgcggctcagtttgaaagc
ctgctgcttccgctggcgatcatcctgatcgtgccgatgacattgctcgccgcgatgacg
ggagtgaacctgcgcggtctggacaacaacatcctgacgcagatcggcctgatcgtgctc
atcgcgctcgccgcgaagaatgcgatcctgatcgtcgagttcgccaagcaggcggaggag
cgaggcctttcggccatcgatgcagcggttgaagccgccgggtcgcgtttgcgcccgatc
cttatgaccagctttgccttcgtcctcggtacgctgccgctggtgctggcgaccggtccg
ggctgggagctgcgccaggcgctcggcaccgcggtcttcttcggaatgatcggagtcacg
gcgttcggcctcatcttcacgccggtcttctacgtggcgacgcgcacgctcggtgagcga
ttggcgcgcggtcgcggccggccgtccgagcagcagccgatgctgctgcccgcggaatag
DBGET
integrated database retrieval system
