Sphingomonas daechungensis: H9L15_13570
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Entry
H9L15_13570 CDS
T07072
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sdh
Sphingomonas daechungensis
Brite
KEGG Orthology (KO) [BR:
sdh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdh03009
]
H9L15_13570
Enzymes [BR:
sdh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
H9L15_13570
Ribosome biogenesis [BR:
sdh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H9L15_13570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
DUF6494
Motif
Other DBs
NCBI-ProteinID:
QNP43001
LinkDB
All DBs
Position
2499195..2500007
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AA seq
270 aa
AA seq
DB search
MASPPQRTKRKPVPRHRPRNSSFSAAPPPRESGPQRIAKLLARAGVASRRNVERMIAEGR
IAINGEKLTTPATLLTDLAGVTVDGKPVRPAAATRLFRFYKPPGTITAIRDPKGRATIYD
KLPPGLPRVMPVGRLDFMTEGLLLLTNDGEWKRKLELPSTAVVRQYRARAFGHVTQAQLD
RLAEGITIEGIHYGSIIANLERRTSRNFWIELSLTEGKNREVRRVLAHLGLQVSRLIRTA
YGPLTLEGLEPGDADEVRQADLDAFRSSLK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcccccgcaacgaacgaaacgaaaacctgtgccgcggcaccgcccgcgcaac
agcagtttttcagccgccccgccaccgcgcgagagcggaccacagcgtattgcaaagttg
ctggctcgcgccggcgtcgcatctcgacgcaatgtcgagcggatgatcgccgaaggccgc
atcgccatcaatggcgagaagctcaccaccccggcgaccttgctgaccgatcttgccggc
gtcacggttgacgggaagccggttcggccggccgcggccacgcggctgttccgcttctac
aaaccgcccgggacgatcaccgcgatcagggacccgaagggccgcgccaccatctacgac
aagcttccgcccggccttccgcgcgtgatgccggtcggccgcctcgacttcatgaccgag
ggcctgctgctgcttaccaacgacggcgaatggaagcgcaagctggagctgccgagcact
gccgttgtccgccagtatcgcgcgcgtgcctttggtcatgtcacccaggcgcagctagat
cggctggcggagggcatcacgatcgaaggcattcactatggctcgatcatcgccaacctc
gagcggcgcacaagccgaaacttctggatcgagctcagcctgaccgagggcaagaaccgc
gaagttcgccgtgtcctcgcccatctcggcttgcaagtctcccggctgatccggaccgcc
tacggaccgctcacgctcgaaggcttggagcccggcgatgccgacgaagtacgccaggcc
gacctcgacgcgttccggtcctcgctgaagtga
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