Sphingomonas daechungensis: H9L15_14805
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Entry
H9L15_14805 CDS
T07072
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sdh
Sphingomonas daechungensis
Pathway
sdh03420
Nucleotide excision repair
sdh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H9L15_14805
03430 Mismatch repair
H9L15_14805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdh03400
]
H9L15_14805
Enzymes [BR:
sdh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9L15_14805
DNA repair and recombination proteins [BR:
sdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9L15_14805
MMR (mismatch excision repair)
Other MMR factors
H9L15_14805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QNP43176
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Position
complement(2709134..2710978)
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AA seq
614 aa
AA seq
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MTLVAPEEWRPQGIDDLEPRAWEALREVERSVCVTAGAGAGKTEFLAQKGSYLLETGLCP
APKRILAISFKRDAARNLSDRIVARCAPDQARRFVSMTFDGFTKHMLDQFREAVPEDFRP
PANYAIAMDTRDERNDFIRRHSFGVAADRLGRAVAECPLPIVEVENERAREILGPYWRDQ
YEHFDRAYLTFAMINRLVDYMLRTNPGIRQALISTYPYVFLDEFQDTTTAQYDLVRTAFG
RSDSVFTAVGDDKQKIMGWAGAMDAAFVRFTADFRARCTALQSNWRSHEDLVAIQHAVAT
RIDPAVEHAIARGRRTVDGTIAAIWEFPTREDEVEGLAEWIAGKVEGGSVEPHDVAILVR
MLANNVEDELAPAFTRHGLILRNVARNVGTIAIQDLLAEELTQSLLPFLRLGAARRNADA
WAAARSVLQWLESPDGEDEIAQERAIARVEEISKRLRVRMGRQAPDAAANVRGVGRLALR
EIGEPLIRRATPSYQRDADFERVLEGFLLLLEESAELGGTWNEVLDRFEGIGQVPLMTVH
KSKGLEFHTVIFFGLDSRSWRSLQPGAEEELKAFFVALTRAKQRAFFTYCRGRGQPIEWL
EELLGDLLPRVFFV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctcgtcgctcctgaggagtggcggccgcaggggatcgacgatctcgagccgcgc
gcctgggaggcgctccgcgaggtggagcgaagcgtttgcgtgaccgcaggggcaggcgcc
gggaagacggaatttctcgcccaaaagggaagttatctactggagacgggtctctgtccg
gcgccgaaacgcatccttgcgatcagcttcaagcgagatgctgcgcgcaacctctccgac
cggatcgtggcgcggtgcgcaccggatcaggcccggcgattcgtgtcgatgaccttcgat
ggattcaccaagcatatgctcgaccagttccgcgaggccgttccggaggatttccgacct
ccggcaaattatgccatcgcgatggacacgcgggacgaacgcaatgacttcattcggcga
cacagcttcggggtggcggctgatcgtctcggacgcgccgtcgccgaatgccctctaccg
atcgtggaagttgagaacgagcgtgcccgcgaaatcctcggcccctactggcgcgaccag
tacgagcatttcgacagggcctatctgacgttcgcgatgatcaatcgcctcgtcgactat
atgcttcgaacgaatcccggcatccgccaggccctgatcagtacctacccttatgtattc
ctcgacgaattccaagacacgaccacagcgcagtacgacctcgttcgcacggcatttggc
cgcagcgatagcgtgttcacggccgtcggcgatgacaagcaaaagatcatgggatgggcg
ggcgcgatggacgcggccttcgttcgtttcaccgccgattttcgtgcccgatgcactgcg
cttcaatccaactggcgctcgcatgaggatctggtcgccatccagcacgccgtggccact
cggatcgatccggcagtcgagcacgccattgcgcgcggtcgtagaactgtcgacggcacg
atcgcggcgatttgggaattcccgactcgcgaggatgaagtcgaaggcctcgcggaatgg
atcgcgggcaaggtcgagggcggctcggtcgagccgcacgacgtcgcaatcttggtccgg
atgctcgccaataatgttgaggacgagctcgcacctgccttcacgaggcacggcctgatt
ctccgcaacgttgcgcgaaatgtcgggacgatcgcgatccaggatctgcttgccgaagag
ctgacgcagagcctgctacccttccttcggctgggtgcggctcggcggaatgccgatgca
tgggcggctgcgcgatccgtcctgcaatggctcgaatctccggacggggaggacgagatc
gcccaggaacgggcgatcgcgagggtggaagaaatctcgaaaaggctccgggtccggatg
gggcgacaggctcccgacgccgccgccaacgtgcgcggcgtaggccgactggcgctgcgc
gaaattggtgagccgctcattcgtagagccacgccttcctatcagcgtgatgccgacttc
gagcgagttctcgagggctttctgctgctgctggaggaatccgccgaactcggcgggaca
tggaatgaagtgctcgaccgtttcgaaggtattggtcaggtgccgctgatgacggtccat
aaaagcaagggccttgagttccacaccgtcatctttttcggcctggactcccgatcgtgg
cgcagcctgcagccaggcgccgaggaagaacttaaggcctttttcgtggctctgacccgc
gcgaagcagcgcgccttcttcacgtattgccgcggtcgcggccaaccgatcgaatggctc
gaagagctgcttggcgacctacttccgcgcgtcttttttgtttga
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