Sphingomonas daechungensis: H9L15_14860
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Entry
H9L15_14860 CDS
T07072
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sdh
Sphingomonas daechungensis
Brite
KEGG Orthology (KO) [BR:
sdh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdh02000
]
H9L15_14860
Transporters [BR:
sdh02000
]
Other transporters
Pores ion channels [TC:
1
]
H9L15_14860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QNP43186
UniProt:
A0ABX6T0Y8
LinkDB
All DBs
Position
2720230..2722356
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AA seq
708 aa
AA seq
DB search
METSRLALAAALTLLASPALAAETASTNADSSAAAAAATADPVPGSAEDAHHAQSDEIIV
TGIRKKSSDVIGGISVLDAGDLTRELRVSIGETLARQPGVSATSFGPTASAPVLRGLSGD
RVRVLTDGIGSLDVSSSGPDHAISINPITADRIEVLRGPSALMFGSSAIGGVVNVIDTRI
PRRVPKNVVGVNVLAGYGSAADERLLNGAFDVPVAGKFVFHVDGNWTKTDDLRTGGFILS
KDLREQAAASPDPDIQALADLKGDLPNSASESKEGAIGFAYIDGGLNVGASVTRHTAKYE
VPIRYSLVPGIEAEAPTIDQEQTRYDFRAEVPISGFFNQVRARAGYADYHHDELEENGDV
GSSFFSKGGEGRFELVQSERQGWGGTSGIQYLDRNARIRGDEKFLPDSDQRQTGLFTLQT
LVRGPLRLEGGARIEFSKLTADADVQLGTPDLSRNFTTWSGSLGGKYEFTPGWRAGLTVS
RSARAPSIDELFANGPHGGSQSFEIGDPNLDPETSLSVEGSLNGDAGPVNLSANVYYSHF
SNFIFQAPTGAVLDDLPVFQTREGAANYYGFEAQASAKLGEALGVRWKGEIQADAVHATV
KNYGPAPFIPPFRILGALEGTRGEVDGRLEVEHAFAHTRTAPIETDTPGYTLVNASVDWH
VFSANPEFSLSLVANNIFDVVARRSTSMLKDYAPLGGRDIRLTARLGF
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaaacctcgcgactggcccttgcggcagccctcaccctccttgcatcccccgctctg
gccgccgaaacggcgagcacgaatgcggattcctctgcggccgcggccgcggcgaccgcc
gatcccgtaccgggaagcgccgaagacgcgcaccacgcgcaatcggatgagatcatcgtc
accggcatccgcaagaagtcgagcgatgtcattggcggcatttccgtgctggatgcaggc
gacctcacccgggagttgcgggtcagcatcggcgagacactggcgcggcagccgggcgtc
agcgcgaccagcttcggcccgacggcgtcggctccggtccttcgcggcttgtccggagat
cgcgtccgggttctgaccgacggcatcggcagcctggacgtatcgtcttcggggcccgac
catgcgatttccatcaacccgatcaccgccgatcgcatcgaggtccttcgcggaccctcg
gccctgatgttcggatcttccgcgattggcggcgtcgtcaatgtcatcgacacgcgcatt
ccgcgtcgcgtccctaagaacgtagtcggagtaaacgttctcgcaggctacgggtccgcc
gctgacgagcggttgctcaacggagcgttcgacgtgccggttgccgggaagttcgtcttt
catgtcgacggcaactggaccaagaccgacgatcttcgcaccggcggcttcatcttgtcg
aaagacctccgcgagcaggcagcagccagtcccgatccggacattcaggcccttgccgat
ctgaaaggcgatctccccaattccgcatcggaatcgaaggaaggggcgatcggtttcgct
tatatcgacggcggcctgaacgtcggcgcctcggtcacccggcacaccgccaagtatgaa
gtgccgatccgttattcgctcgtccctgggatcgaggcggaagcgccgaccatcgaccag
gagcagacgcgctacgacttccgcgccgaagtgccgatctccggctttttcaaccaggtg
cgcgcacgggccggctatgccgactatcaccacgatgaactggaggagaatggcgacgtc
ggctccagcttcttcagcaagggcggtgaaggccgctttgaactggtgcaatcggaacgc
cagggctggggcggaacgtccggcatccagtatctcgaccgcaatgccaggatccgcggc
gacgagaaattccttccggacagcgaccagaggcaaacggggctgttcacactgcagacc
ttggttcgcggcccacttcggctggaaggcggcgcccgcatcgagttcagcaagctcacc
gccgacgcggacgtgcaactcggaacgccggacctgtctcggaacttcacgacctggtcc
ggatcgctcggcggcaagtacgaattcacgccgggctggcgtgcgggtctgacggtatcg
cgaagcgcgcgtgcaccatcgatcgacgaactcttcgccaacggcccgcacggcggcagc
cagtcgttcgaaatcggcgacccgaacctcgatccggaaaccagcctcagcgtcgaaggc
tctttgaatggagacgctggaccggtgaacctgtcggcaaacgtctactacagtcacttc
tcgaacttcattttccaggcaccgacgggggctgtcctcgacgacctgccggtgttccag
acccgcgagggcgcggcgaactattacgggttcgaagcccaggcgagtgcaaagctcggc
gaagcgctcggtgtgcgctggaagggcgagatccaggccgatgcagtccatgccacggtg
aagaattatggtccggcgccgttcattccgcctttccgaatcttgggcgcgctggaggga
acgcggggcgaagtcgacgggcggcttgaggtcgagcatgccttcgcgcacacccgcact
gcgccgatcgagaccgacacgcccggctacaccttggtgaacgcctcggtggactggcac
gtcttttctgccaacccggaattctcgctgtcgctggtagcgaacaacatcttcgatgtc
gtcgcccggcgcagcacgagtatgctcaaggattatgccccgcttggcggccgcgacatt
cgactgacggcccggctgggcttctag
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