Spiroplasma diminutum: SDIMI_v3c00180
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Entry
SDIMI_v3c00180 CDS
T02741
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sdi
Spiroplasma diminutum
Pathway
sdi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SDIMI_v3c00180 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdi01007
]
SDIMI_v3c00180 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdi03016
]
SDIMI_v3c00180 (lysS)
Enzymes [BR:
sdi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SDIMI_v3c00180 (lysS)
Amino acid related enzymes [BR:
sdi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SDIMI_v3c00180 (lysS)
Transfer RNA biogenesis [BR:
sdi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SDIMI_v3c00180 (lysS)
Prokaryotic type
Other AARSs
SDIMI_v3c00180 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
GDA1_CD39
Motif
Other DBs
NCBI-GeneID:
16853907
NCBI-ProteinID:
AGR41722
UniProt:
S5M132
LinkDB
All DBs
Position
20034..21545
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AA seq
503 aa
AA seq
DB search
MSNNFERNFSEQENIRREKLNNLIEKGRDPFVENEFDRSHSLNELIEKFDSFTKEELQEK
TDIIVSVAGRIRLFREAGKKAIFANIQDQNSSIQIYVRQDELGEEEFEYFRNLDLGDIIG
IQGIMMKTDHGELTIRVKNAKLLTKALKPLPDKHLGIADIEEKYRRRYVDLIINPESKQV
FIDRTKIIRTMQSILDSKGYMEVETPILQSVRGGASAKPFVTHYNALDNEFVLRIATELH
LKRCIVGGFDGVYEIGRIFRNEGISTRHNPEFTSVELYVAYKNMDFLMDLCEELFRECSL
AVRGTTKINYGGHDLDLAKPFKRWHMVDAIKEVCGVDFWQDMTYIEACEIAKQKNVKVEK
HHFSVGHIINLFFEEFVEEKIIEPTFIWGHPKEISPLSKLNAKDSRFTDRFELFIINREY
ANAFAELNNPIDQYERFVDQIKEAAAGNDEANDMDIDFIEALEYGMPPTGGIGIGIDRMV
MLLTNSESIKDVLLFPQMKPRGN
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataattttgaaagaaatttttcagaacaagaaaatattagaagagaaaaactt
aataatctaattgaaaaaggaagagacccttttgttgaaaatgaatttgatagatcacat
tcacttaatgaattaattgaaaaatttgattcatttacaaaagaagaattacaagaaaaa
acagatattattgtttctgttgctggaagaattagattatttagagaagctggaaaaaaa
gcaatttttgcaaatattcaagatcaaaactcttcaattcaaatttatgtaagacaagat
gaattgggtgaagaggaatttgaatattttagaaatttagatcttggtgatattattggt
attcaaggaataatgatgaaaactgatcatggtgaattgacaataagagtaaaaaatgca
aaacttctaactaaagctttaaaaccattaccagacaagcatttgggaattgcagatatt
gaagaaaagtatagaagaagatacgtagatttaattattaatccagaatcaaaacaagtt
tttattgatagaacgaaaataattagaacaatgcagtcaattttagattcaaaaggttat
atggaagttgaaactccaattttacagtctgttagaggtggagcaagtgctaaacctttt
gttacacattataatgctttagacaatgaatttgttctaagaattgcaacagaattacat
ttaaaaagatgtattgtaggtggatttgatggagtttatgaaataggtagaatttttaga
aatgaaggaattagtactagacataatccagaatttacatcagttgaactttatgttgca
tataaaaatatggatttcttaatggatttatgtgaagaattgtttagggaatgttctctt
gcagttagaggaactacaaaaattaattatggtggccatgatttagatttggcaaaacca
tttaaaagatgacacatggtagatgctattaaagaggtttgtggagttgacttttgacaa
gacatgacttatatagaagcttgtgaaattgcaaaacaaaaaaatgttaaagtagaaaaa
catcatttttctgttggacatatcattaacctattctttgaagaatttgtagaagaaaaa
ataattgaaccaacttttatatgaggacatccaaaagaaatatctccattatcaaaattg
aatgcaaaagattcaagatttacagatagatttgaattgtttatcattaatagagaatat
gcaaatgcatttgcagaactaaacaatccaattgatcaatacgaaagatttgttgatcaa
ataaaagaagctgctgcgggaaatgatgaagcaaatgatatggatattgatttcatagaa
gctttagaatatggaatgcctccaactggtggaattggaattggaattgatagaatggtt
atgttattaacaaattcagaatcaataaaagatgtattattattccctcaaatgaaacca
agaggtaactaa
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