Spiroplasma diminutum: SDIMI_v3c02140
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Entry
SDIMI_v3c02140 CDS
T02741
Symbol
yabC
Name
(GenBank) methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
sdi
Spiroplasma diminutum
Brite
KEGG Orthology (KO) [BR:
sdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdi03009
]
SDIMI_v3c02140 (yabC)
Enzymes [BR:
sdi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
SDIMI_v3c02140 (yabC)
Ribosome biogenesis [BR:
sdi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SDIMI_v3c02140 (yabC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
DUF434
UPF0181
Motif
Other DBs
NCBI-GeneID:
16854249
NCBI-ProteinID:
AGR41918
UniProt:
S5MDX2
LinkDB
All DBs
Position
243447..244325
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AA seq
292 aa
AA seq
DB search
MLKNQNTFKNNLSTIYLIGTPIGNLEDISKRVIDTFQLADVIYCEDTRVSLKLFEKLKIN
KKLKALHKFNEYSISESFIEDITKYKNIAIISDAGVPCISDPGAIVIQQVLQSNVEVNIT
SINCGPAYIHALAASGFTSKRNSFLGFLDKKNIEKELKEVLELTSKTDSAICFYESVHRI
QSTLNQLSLLISKETKIILARELTKLNEQYLRGTIEEICDFINNDNLTLKGEFCVIIDSN
YSLTNEVKIDMNNIIDEIQSLINKKISKKDAIKTVSKKYNINKNELTKYFYK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaatcaaaatacatttaaaaataacttatcaacaatttatttgataggtact
cctattggtaatttggaagatatttcaaaaagagtaattgatacttttcaattagctgat
gtaatttattgtgaagatactagagttagtttaaaattatttgaaaaacttaaaataaat
aaaaaattaaaagcacttcataaatttaatgaatattctataagtgaaagtttcattgaa
gatattactaaatacaaaaatatagcaataataagtgatgcaggagttccttgtattagt
gatccaggagcaatagtcattcaacaagttctacaaagcaatgtagaagtaaatattaca
tctataaattgtggtcctgcatatattcatgcattggctgcatcagggtttacttcaaaa
agaaatagttttttaggatttttagataaaaagaatattgaaaaagaattaaaggaagtt
ttagaattaacttctaaaacagatagtgcaatctgtttttatgaatctgttcatagaatt
caatcaactttaaatcaattatcattgttgatttcaaaagaaactaaaatcattcttgca
agagagcttacaaaactaaatgaacaatatttaagaggaactattgaagaaatatgtgat
tttattaataatgataatttaactttgaaaggtgaattctgtgtaattattgattcaaat
tattctttaacaaatgaagtaaagatagatatgaataatataatagatgaaatccaaagc
ttaattaataaaaaaataagtaaaaaggacgcaattaagactgtatcaaaaaaatataat
attaataaaaatgaattaactaaatatttttataaataa
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