Spiroplasma diminutum: SDIMI_v3c02200
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Entry
SDIMI_v3c02200 CDS
T02741
Symbol
ytjP
Name
(GenBank) dipeptidase PepV
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sdi
Spiroplasma diminutum
Pathway
sdi01100
Metabolic pathways
sdi01120
Microbial metabolism in diverse environments
sdi01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SDIMI_v3c02200 (ytjP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdi01002
]
SDIMI_v3c02200 (ytjP)
Enzymes [BR:
sdi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SDIMI_v3c02200 (ytjP)
Peptidases and inhibitors [BR:
sdi01002
]
Metallo peptidases
Family M20
SDIMI_v3c02200 (ytjP)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
FucT_N
Motif
Other DBs
NCBI-GeneID:
16854182
NCBI-ProteinID:
AGR41924
UniProt:
S5LVR5
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Position
246814..248169
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AA seq
451 aa
AA seq
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MINVEKEILLGQYFDQALEETKKIVAMPSYRRDLTYGAPVNEDTKNVLNHCIDLLKSFGF
ETFIAPDYRYGYADYGNGEKLFGIICHLDVVPAGNIDEWNTNPFEPVIKDGKLIGRGTFD
DKGPTMMNIFAFKYLIDHGFKPDYKIRFIFGTSEETNWECMEAYVKNEQLCDLGYVPDGH
FPVVYAEKWIADVDLVGNFESEFELKGGEVYNAVNDLVQYKGPKQNEIALWLKNNNIDSY
ENDGYLFVKGISAHGSLPFKGVSASTWLLKAIDANGLKHPLAQFVAQYGHLNFDMKEIFG
DLTDETGDLTACNGIVNISKNDYRFTINFRIPCTKNPQKDVVDVLEKFVNERGIELKLSS
IEDRVYFPKDSEVVKNIMEVYKEVTGDLKAEPIAIGGGTFAKSMPNMIAFGAEFDLNDST
MHAYNEYVKIDDLKKMMEIYAKSLVKLTKLK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgataaatgtagaaaaagagatattacttggtcaatattttgatcaagctttagaagaa
acaaaaaaaatagttgctatgccttcatatagaagagatttaacatatggagcacctgta
aatgaagatacaaaaaatgttttaaatcattgtattgatttattaaaatcttttggcttt
gaaacttttatagcacctgattatagatatggttatgcagattatggtaatggagaaaaa
ttatttggtattatttgtcacttagatgttgttcccgcaggaaatattgatgaatgaaat
actaatccatttgaaccagtaattaaagatggaaaattaatcggaaggggaacttttgat
gataaaggaccaactatgatgaatatttttgcatttaaatatttaattgatcatggattt
aaacctgactataaaattagatttatttttggaacaagtgaagaaacaaattgagaatgt
atggaagcatatgttaaaaacgagcaattatgcgatttaggttatgttcctgatggacat
tttccagtagtttatgcagaaaaatgaattgcagatgtagatttagttggtaattttgaa
tctgaatttgaattaaaaggtggagaagtttataatgctgtaaatgatttggttcaatat
aaaggaccaaaacaaaatgagattgccttatgattaaaaaacaataatatagattcttat
gaaaatgatggttacttatttgttaaagggatctcagctcatggaagtttaccatttaaa
ggagtatctgcttcaacttgacttttaaaagccatagatgccaacgggttaaaacatcca
ttagcacaatttgttgcccaatatggtcacttaaattttgatatgaaagaaatttttggt
gatttaacagatgaaactggagatttaactgcatgtaatggaattgtaaatatttcaaaa
aatgattatagatttacaattaactttagaattccttgtacaaaaaatccacaaaaagat
gtagtagatgttcttgaaaaattcgtaaatgaaagaggcattgaattaaaattatcttca
attgaagatagagtatatttcccaaaagacagtgaagttgtaaaaaatattatggaagta
tataaagaagttacaggagatttaaaagctgaaccaattgctattggtggagggactttt
gcaaaatcaatgccaaatatgattgcatttggagcagaatttgatttaaatgattcaact
atgcatgcttataatgaatatgtaaaaatagatgatttaaagaaaatgatggaaatctat
gcaaaatcacttgttaaattaactaaactaaaataa
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