Spiroplasma diminutum: SDIMI_v3c02560
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Entry
SDIMI_v3c02560 CDS
T02741
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
sdi
Spiroplasma diminutum
Brite
KEGG Orthology (KO) [BR:
sdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdi03032
]
SDIMI_v3c02560 (hupB)
03036 Chromosome and associated proteins [BR:
sdi03036
]
SDIMI_v3c02560 (hupB)
03400 DNA repair and recombination proteins [BR:
sdi03400
]
SDIMI_v3c02560 (hupB)
DNA replication proteins [BR:
sdi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SDIMI_v3c02560 (hupB)
Chromosome and associated proteins [BR:
sdi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SDIMI_v3c02560 (hupB)
DNA repair and recombination proteins [BR:
sdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SDIMI_v3c02560 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-GeneID:
16854153
NCBI-ProteinID:
AGR41960
UniProt:
S5MJ31
LinkDB
All DBs
Position
281955..282230
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AA seq
91 aa
AA seq
DB search
MTKKELSEKLSAEFGSTKAEAERMINYVFDEISNALVKKEEVAIAGFGKFVTAERAAREG
VNPATGAKIKIAATTVAKFKVAKQLKEAVAK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaagaattatctgaaaaactatcagctgaatttggtagcactaaagcagaa
gctgaaagaatgattaattatgtttttgatgaaatatcaaacgcattagttaaaaaagaa
gaagtagcaattgcaggattcggtaaattcgttactgctgaaagagctgctcgtgaaggt
gtaaacccagcaactggagcaaaaattaaaattgctgcaactactgtagcaaaattcaaa
gtagctaaacaattaaaagaagcagttgctaaataa
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