Spiroplasma diminutum: SDIMI_v3c03460
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Entry
SDIMI_v3c03460 CDS
T02741
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sdi
Spiroplasma diminutum
Brite
KEGG Orthology (KO) [BR:
sdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdi03019
]
SDIMI_v3c03460
03009 Ribosome biogenesis [BR:
sdi03009
]
SDIMI_v3c03460
Enzymes [BR:
sdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SDIMI_v3c03460
Messenger RNA biogenesis [BR:
sdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SDIMI_v3c03460
Ribosome biogenesis [BR:
sdi03009
]
Prokaryotic type
rRNA helicases
SDIMI_v3c03460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Flavi_DEAD
PhoH
ApbA
Motif
Other DBs
NCBI-GeneID:
16854635
NCBI-ProteinID:
AGR42050
UniProt:
S5MJA4
LinkDB
All DBs
Position
384306..385673
Genome browser
AA seq
455 aa
AA seq
DB search
MKFSDLGFKKFINDALEEIDFIYPTKIQEKVIPLIKKHKSVIAQSHTGTGKTHSFLLPIL
NNINYEEANKIQCLIVTPTRELARQIYENTKDILKFNEKGTVQLFVGGDDIEKSIQNVKT
KQPTIVIGTPTRLKKMYEEGNLFITTAKYVVIDECDMIFDLGFIEEVDFMLSKINKDVNV
SLFSATINNGLKPFLQKYLSNSIFIENKDSNPTNKNIEHVLIWTKNKENKDVLRTITKSI
NPYVCMIFLNKKDQIKEIISWLNEFGIKNVGELHGDLDSRQRTNMQKRIQSGEFKWIVAS
DVAARGIDIDGVSHIISVDLPKDLDYYIHRSGRTGRNQYSGQSYVLFNSTNQHQIDELKS
KGISFTNFKLANNELIEINTTKKKKEFNAALPVNIETKKIIDKYKGKKVKPGYKKRRKAE
VEKVKQDIRRKHIKESIAKIKKDKYKKRREELFDN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcagacttaggatttaaaaaatttataaatgatgcattagaagaaatagat
tttatatatccaacaaaaattcaagaaaaggttattccacttattaaaaagcataaaagt
gtaattgctcaatcacacacaggtactggaaagactcattctttcttattgccaatttta
aataatataaattatgaagaagcaaataaaattcaatgtttaattgttactccaacaaga
gagcttgcaagacaaatatatgaaaatacaaaagatattttaaagtttaatgaaaaggga
acagttcaattatttgttggtggtgatgatattgaaaaatcaattcaaaatgttaaaaca
aaacaaccaacaatagtaattggaaccccaactagacttaaaaaaatgtatgaagagggt
aatttatttattacaacagcaaaatatgttgtaatcgatgaatgtgatatgatttttgat
cttggattcattgaagaagttgactttatgctttcaaaaataaataaagatgttaatgtt
tctttattttctgcaactataaataatggattaaaaccgttcttacaaaaatatttatca
aattcaatatttattgaaaataaagattcaaatccaacaaataaaaatattgaacatgta
cttatttgaacaaaaaataaagaaaataaggatgttttaagaactattacaaaatcaatt
aatccttatgtttgcatgatctttttaaataaaaaagatcaaatcaaagaaattatttct
tgactaaatgaatttggaattaaaaatgtaggagaattacatggtgatttagattcaaga
caaagaactaatatgcaaaagagaattcaaagtggagagtttaagtgaattgtagcttct
gatgtagctgcaaggggaattgatattgatggagtaagtcatattatttcagtagattta
ccaaaagatttagactattatattcacagaagtggaagaactggaagaaatcaatattca
gggcaaagttatgtgttgtttaattcaacaaatcagcatcaaattgatgaattaaagtca
aaaggtatttcatttacaaattttaaattggcaaataatgaattaattgaaattaataca
actaagaaaaaaaaggaatttaatgcagcattacctgtaaatattgaaactaaaaagatt
attgataaatataaaggtaaaaaagttaaaccaggatataaaaaacgtagaaaagcagaa
gttgaaaaagttaaacaagatataagaagaaaacatattaaagagtcaattgctaaaatc
aaaaaggataaatataagaaaagaagagaagaactatttgataattaa
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