KEGG   Spiroplasma diminutum: SDIMI_v3c03860
Entry
SDIMI_v3c03860    CDS       T02741                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
sdi  Spiroplasma diminutum
Brite
KEGG Orthology (KO) [BR:sdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sdi03032]
    SDIMI_v3c03860 (parE)
   03036 Chromosome and associated proteins [BR:sdi03036]
    SDIMI_v3c03860 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sdi02048]
    SDIMI_v3c03860 (parE)
Enzymes [BR:sdi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     SDIMI_v3c03860 (parE)
DNA replication proteins [BR:sdi03032]
 Prokaryotic type
  DNA Topoisomerases
   SDIMI_v3c03860 (parE)
Chromosome and associated proteins [BR:sdi03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    SDIMI_v3c03860 (parE)
Prokaryotic defense system [BR:sdi02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    SDIMI_v3c03860 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 TOPRIM_C
Other DBs
NCBI-GeneID: 16854481
NCBI-ProteinID: AGR42090
UniProt: S5MJD6
LinkDB
Position
433906..435840
AA seq 644 aa
MAENNKDLSYTEDSIQILEGLEAVRKRPGMYIGSTDSRGLHHLVWEIVDNSIDEALAGIC
TEINVAIEKDGSITVKDNGRGVPIGSYKGTKQSTPEIIFSVLHAGGKFGGDGYKTSGGLH
GVGSSVVNALSSKFKVTIHRDGLISKIKFANGGKLVEPLKQIGTSKQNGTTVNFLPDETM
FSTTKFSFSTISERLKESALLNSGLKLTLKDNRSDKYIEYIYENGLTEFVNELKGDQKAL
CSPILLKGSEQEIDVEIALTYTTDFSETVLGFANNVKTSDGGTHITGFRTGLVKALNEYG
KTQSILKEKDKKLDSSDVKEGLIAIVTVKIPENLIQYEGQTKGKLGTSEARTACEKVTEQ
HISFWLQENKTIAISIIEKALLARKAKEEARKARQAVRDQKSKSKSRTMLGKLTPAQGKN
KIENELFLVEGDSAGGSAKSGRDRKFQAILPLRGKVINAEKTKLLDLLKNEEITTIINAI
GAGIGSDFDISDINYGKIILMTDADTDGAHIQTLLLTFFYRYMKDLIVNKNIHIAMPPLF
KITTGSNKKDFIYLWTEEELASYMKKAKSKVEIQRYKGLGEMNADQLWETTMDPEHRKLI
QVTIDDALAAENSFRTLMGDNSEKRKEWIEENVKFTLEENVDFI
NT seq 1935 nt   +upstreamnt  +downstreamnt
atggctgaaaataataaggatttatcgtatacagaagatagcattcagatcttagaaggt
ttagaagctgttagaaaaagaccaggaatgtatattggttcaactgattcaagaggttta
caccatttagtctgagaaatagttgataattcaattgacgaagcattagcaggtatttgt
acagaaattaatgttgcaattgaaaaagatggatcaattactgttaaagataatggtaga
ggggttcctattggtagttataagggtacaaaacaatcaactccagaaattattttctca
gtattacatgctggaggaaaatttggtggagatggttataaaacttctgggggacttcac
ggagttggttcttctgttgttaatgcattatcaagtaaatttaaagttacaattcataga
gatggacttatttcaaaaattaagtttgcaaatggtggtaaattagttgaaccattaaaa
caaattggaacttcaaaacaaaatggaacaacagtaaactttttaccagatgaaacaatg
ttttctacaactaaattctcattttcaacaataagtgaaaggttaaaagaatctgcatta
ttgaattcaggtttaaaattaactttaaaagataatagaagtgataaatatattgaatat
atttatgaaaatggacttacagaatttgtaaatgagcttaaaggtgatcaaaaggcttta
tgttcaccaattcttttaaaaggaagcgaacaagaaatagatgttgaaattgctttaact
tatacaactgatttttctgaaacagttttaggatttgcaaataatgttaaaacaagtgat
gggggaactcatataacaggttttagaacaggattagtaaaggctttaaatgaatatgga
aaaactcaaagcatcttaaaagaaaaagataaaaaacttgattcttcagatgtaaaagaa
ggtttaattgctatagttacagtaaaaatacctgaaaatcttattcaatatgaaggacaa
acaaaaggtaaacttggaacaagtgaagctagaacagcttgtgaaaaagtaactgagcaa
catattagtttttgactacaagaaaataaaactattgcaatttcaataatagaaaaagca
cttttagctagaaaagctaaagaagaagcacgtaaagcacgtcaagcagtaagagatcaa
aaatcaaaatcaaaatcaagaacaatgcttggaaaactaactcctgctcaaggaaaaaac
aaaattgaaaatgaattgtttttagtcgaaggggattcagctggaggaagtgctaaatca
ggaagagatcgaaaattccaagctatattaccacttagaggtaaagtaattaatgcagaa
aaaacaaaattacttgatttattaaaaaatgaagagatcacaacaatcattaatgcaata
ggcgctggaattggaagtgactttgatatttctgatataaattatggaaagataattcta
atgacagatgctgacactgatggtgcacatattcaaacattattattaacattcttctat
cgttatatgaaagatttaattgtgaataaaaatattcacattgctatgccaccattattt
aaaataacaacaggttcaaataaaaaggactttatatatttatgaacagaagaagaatta
gcatcatatatgaaaaaagctaagtctaaagttgaaattcaaagatataaaggacttggt
gaaatgaatgctgaccaactttgagaaacaacaatggatccagagcatagaaaattgata
caagtaacaattgatgatgcgcttgcagcagaaaattcatttagaactttgatgggtgat
aactcagaaaaaaggaaagaatgaattgaagaaaacgttaaatttacactagaagaaaat
gtagattttatttaa

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