Spiroplasma diminutum: SDIMI_v3c07070
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Entry
SDIMI_v3c07070 CDS
T02741
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sdi
Spiroplasma diminutum
Pathway
sdi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SDIMI_v3c07070 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdi03400
]
SDIMI_v3c07070 (mutM)
Enzymes [BR:
sdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SDIMI_v3c07070 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SDIMI_v3c07070 (mutM)
DNA repair and recombination proteins [BR:
sdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SDIMI_v3c07070 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
NFACT_N
DUF421
Ribosomal_S13
SBP
Motif
Other DBs
NCBI-GeneID:
16854605
NCBI-ProteinID:
AGR42411
UniProt:
S5M0M4
LinkDB
All DBs
Position
complement(786514..787347)
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AA seq
277 aa
AA seq
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MPELPEVETVVRTLNKKIKGLIIKNVKITYPNLLKTDISITDFENTLKDRKIDNISRIAK
HIIFELQDLVLISHLRMEGKWFVYESGSLYDTKHVEAIFELNNNKLLVYSDTRKFGTFHL
QEKNTFKSLKPINKVGPEPFDSSLNGQYLYDIMSKSNKHIKTILLDQTKISGIGNIYADE
ILFDSKIHPEKRASSLKISDYDQILKSSIKILKRSVELGGSTIDSYQPEQGIDGKFQNEL
KVHTRKGKPCYECGKIIEKIKVNGRGTYFCQKCQSLY
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagtcgaaacggtagttagaactttaaataagaaaataaaggga
ttaattataaaaaatgtcaaaataacctatccaaatttactaaaaactgatatatcaatt
acagattttgaaaatactttaaaagatagaaaaatagataatatatcaagaatagcaaag
catatcatttttgaattacaggatttggttctaataagtcatttaagaatggaaggaaaa
tgatttgtatatgaaagcgggtcgctatatgatacaaaacatgttgaagctatttttgaa
ttaaataataataaattattagtttacagtgatacgagaaaatttggtacatttcattta
caagaaaaaaatacatttaaaagtttgaaacctattaacaaagtgggtccagagccattt
gacagcagtttaaacggacaatatctatacgatataatgtcaaagtcaaataagcacatt
aaaactattctattagaccagacaaaaatatcgggtattggtaatatttatgcagacgaa
atactttttgattcaaagattcatcctgaaaagagagcaagctctttaaaaatttcagat
tatgatcaaattctaaagtcatctattaaaatacttaaaaggtcagttgaattggggggt
tctacaattgattcctatcaaccagaacaaggaattgatggtaaatttcaaaatgaatta
aaagttcatacaagaaaaggcaaaccatgttatgaatgtggaaaaattattgaaaaaata
aaagttaatggaagaggtacttatttctgtcaaaaatgtcaaagtttatattaa
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