Spiroplasma diminutum: SDIMI_v3c07080
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Entry
SDIMI_v3c07080 CDS
T02741
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sdi
Spiroplasma diminutum
Pathway
sdi03030
DNA replication
sdi03410
Base excision repair
sdi03420
Nucleotide excision repair
sdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SDIMI_v3c07080 (polA)
03410 Base excision repair
SDIMI_v3c07080 (polA)
03420 Nucleotide excision repair
SDIMI_v3c07080 (polA)
03440 Homologous recombination
SDIMI_v3c07080 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdi03032
]
SDIMI_v3c07080 (polA)
03400 DNA repair and recombination proteins [BR:
sdi03400
]
SDIMI_v3c07080 (polA)
Enzymes [BR:
sdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SDIMI_v3c07080 (polA)
DNA replication proteins [BR:
sdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SDIMI_v3c07080 (polA)
DNA repair and recombination proteins [BR:
sdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SDIMI_v3c07080 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SDIMI_v3c07080 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
OST_P1
Motif
Other DBs
NCBI-GeneID:
16854612
NCBI-ProteinID:
AGR42412
UniProt:
S5M2V3
LinkDB
All DBs
Position
complement(787360..790056)
Genome browser
AA seq
898 aa
AA seq
DB search
MKKKFLLVDGNALIFRAFYSSYGRATLTTKSGIPTNAVYSFINMLMNIIEKNEYFCVKVA
FDKGKKTFRHDKLENYKAGRAKTPSELVIQFPIVREFLTNANIEWFEVDNYEADDIIGTI
SQILESDAEAETHILTSDQDMYQLISDKTFVLSPQVGTSDLMVYTKEKLYEKWGVSPEQV
IDYKGLRGDSSDNIKGVAGIGEKSAKELLQEFHTLENIYANIDKIKGAKQAKLIAGENDA
FLSKEIATIYKDMNLGMINFNNTVINFEGLKDFFVRYEMNSLLKKYTSKTEVDLIDNKLD
YKILNKWNFEFNDEINYIYLETLNDNYHTSAVIGLAISNKKGNFYYSFNSSEEVNIFNWN
HSVIDEEFQSFLLNAKFKSYDIKKTIISLKKMGYKVMPQNFTYDMMIGCYVINSNVKSTF
EQHLIMIDPSNELKTFDEIFGKGVKKTHLIDEKIKMDYLVNKVLIIKKYENEILSKLEEN
NQKSLYENIELPFSKVLIDIEIEGIEVDKLELKKQEDNILQLLTKIELEIKTDLSEYIDD
DFNIASPKQLKELLFEKLKLPNYNKGSTDRETLDAIEDKHPVISKIITFRKYSKLYSTYL
KGFEKFIHSDSKVHTIFNQTLTNTGRLSSSYPNIQNISVRDEEQKNVRKIFVTNENNTYL
SFDYSQIELRVLADIVNEQRLIEIFSMNRDIHSEAARSIFNLTNEQEVSSDQRRVAKVFN
FGILYGLSDFGLAKDLKISIPQAKEYIKAYYQAFPQILKFKEEVVKFGYENGYVETLGNR
RRYIYELSNSNYMVKQFGERAAVNAPIQGTAADILKVAMINVFDNLRKNDLKSKMVAQIH
DEIILLVKNEELEKVKKMVLETMKNAYNELLKISNKNRKALVELDINFSQANDWFNLK
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaaattcttgcttgttgatggtaatgctttaatttttagagcattttatagt
tcttatggtagagcaactttaacaacaaaaagtggtataccaacaaatgcagtatactca
tttattaatatgttaatgaatatcattgaaaaaaatgaatatttttgtgtcaaagttgct
tttgataaaggcaaaaaaacatttagacatgataaacttgaaaattataaagctggaaga
gcaaaaactccttcagaattggttatacaatttcctattgtaagagagtttttaacaaat
gcaaatattgaatgatttgaagttgataattatgaagctgatgatattattggaactatt
tctcaaatactagaatcagatgctgaagcagaaactcatatattaacaagtgatcaagat
atgtatcaattaatttctgataagacatttgttttatcaccacaagttggaacaagcgat
ttaatggtatatacaaaagaaaaattatatgaaaaatgaggtgtttctccagaacaagtt
attgattataaaggattgcgtggagattcatcagataacattaaaggtgtggcaggaatt
ggagaaaaatcagcaaaagaacttcttcaagaatttcatacgctagaaaatatttatgct
aatattgacaaaataaagggtgcaaagcaagcaaaacttattgctggtgaaaatgatgca
tttctttcaaaagaaattgctacaatttataaagacatgaatttaggaatgataaacttc
aataatactgtaattaattttgaaggtctaaaggatttctttgtaagatatgaaatgaat
tctctattgaaaaaatatacttctaaaactgaagtagatttaattgataataagttagat
tataaaatattaaataaatgaaattttgaatttaatgatgaaataaattatatatattta
gaaactttaaatgataattatcacacaagtgctgttataggtttagcaatatctaataaa
aagggtaatttttattattcatttaattcaagtgaagaagttaatatatttaattgaaat
cattctgtaattgatgaagaatttcaaagttttttattaaatgctaaatttaaatcctat
gatattaaaaaaactattatttctcttaaaaaaatgggatataaagtaatgccacaaaat
tttacttatgacatgatgattgggtgttatgtaataaactctaatgttaaatcaactttt
gagcagcatttaataatgattgatccttctaatgaattaaaaacttttgatgaaattttt
ggaaaaggtgtaaaaaaaactcatctaattgatgaaaaaattaaaatggattatcttgta
aataaagttttaataatcaaaaaatatgaaaacgaaatactttcaaaattagaagaaaat
aatcagaaatcattatatgaaaatattgaactaccattttcaaaagtgctaattgatatt
gaaattgaaggaattgaagttgataaattagaattaaaaaaacaagaagataatatattg
caactattaacaaaaatagaattggaaattaaaaccgatttaagtgaatatattgatgat
gattttaatatagcatcaccaaaacagttaaaggaattgctttttgaaaaattgaaatta
ccaaattataataaaggtagtacagatagagaaactttggatgcaattgaagataaacat
cctgtaatttcaaaaataataacttttagaaaatacagtaaattatattcaacatatcta
aagggatttgaaaagtttattcattcagatagtaaagttcatactatatttaatcaaaca
cttacaaatacagggagattaagttctagttatccaaatattcaaaatatttctgtaaga
gatgaagaacaaaaaaatgtaagaaagatatttgttacaaatgagaataatacttattta
agttttgactattcacaaattgaacttagggttcttgcagatattgtaaatgagcaaaga
ttaattgaaattttttcaatgaacagagatattcactctgaagctgcaagaagtattttt
aatttaaccaatgagcaagaagttagttcagatcaaagaagagtagccaaagtatttaac
tttggaatactatatggattaagtgattttggtcttgcaaaagacttaaaaatatcaatt
ccgcaagctaaagaatatataaaagcttactatcaagcttttcctcaaattttgaaattt
aaagaagaggtagttaaatttggatatgaaaatggatatgtagaaactcttggaaataga
agaagatatatttatgaattatcaaattcaaattatatggtgaaacaatttggtgaaaga
gctgcagtaaatgctccaattcaaggaacagcagctgatatattaaaagttgcaatgata
aacgtatttgataatttaagaaaaaacgatttaaaatcaaagatggttgctcagattcat
gatgaaattattttgttagtaaaaaatgaggaattagaaaaagtaaaaaaaatggttttg
gaaactatgaaaaatgcttataatgaattattgaaaatatcaaataagaatagaaaagca
cttgttgagcttgatattaatttttcacaagcaaacgattgatttaatttaaaataa
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