Spiroplasma diminutum: SDIMI_v3c08220
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Entry
SDIMI_v3c08220 CDS
T02741
Symbol
rpoE
Name
(GenBank) DNA directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
sdi
Spiroplasma diminutum
Pathway
sdi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SDIMI_v3c08220 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdi03021
]
SDIMI_v3c08220 (rpoE)
03400 DNA repair and recombination proteins [BR:
sdi03400
]
SDIMI_v3c08220 (rpoE)
Transcription machinery [BR:
sdi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SDIMI_v3c08220 (rpoE)
DNA repair and recombination proteins [BR:
sdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SDIMI_v3c08220 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
16854496
NCBI-ProteinID:
AGR42526
UniProt:
S5M0Z3
LinkDB
All DBs
Position
complement(906214..906681)
Genome browser
AA seq
155 aa
AA seq
DB search
MSKLSPINLAYNYLNDCKDNVSFEDIWNTISKEINGDNDFKNEIIAELYSDLVLDNRFAL
TSDGKWGLRDYLKFDDVKKQYEYVDKFETTEEFEDIDSIMDSDLYNDDTGEHVGKIKKLL
DHNNNDSLDETLDDIDEDDDEDDIDEDDDIDEDEY
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattatcaccgattaatttagcttacaattatttaaatgattgtaaagataat
gtgtcttttgaagatatttgaaatacaatatctaaagaaataaacggagacaatgatttc
aaaaatgaaattatagctgaactttatagcgatttggttcttgataatagatttgcatta
acatctgatggtaaatgaggtttaagagattatcttaaatttgatgatgttaaaaaacaa
tatgagtatgttgataagtttgaaacaacagaagaatttgaagacattgattcaataatg
gactcagatctttataacgatgatacaggtgagcatgttggtaaaataaaaaaattatta
gaccataataataatgattcattagacgaaaccttagatgatattgatgaagatgatgat
gaggatgatattgatgaagatgatgatattgatgaagatgaatattaa
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