Selenomonas dianae: QU667_05340
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Entry
QU667_05340 CDS
T09257
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sdia
Selenomonas dianae
Brite
KEGG Orthology (KO) [BR:
sdia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdia03009
]
QU667_05340 (rimO)
Enzymes [BR:
sdia01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QU667_05340 (rimO)
Ribosome biogenesis [BR:
sdia03009
]
Prokaryotic type
ribosomal protein modification factors
QU667_05340 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
DUF4252
HAT_KAT11
Motif
Other DBs
NCBI-ProteinID:
WLD83380
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Position
1083050..1084378
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AA seq
442 aa
AA seq
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MKAGFISLGCAKNLVDTEVMLGIMQEHGIEITNEPAEADILIVNTCAFIQSAKEESITTV
LGMADYKETGRCRSLIVAGCLGQRYGQQLLDEIPEANAIIGTGAWSRIMEVIQETLKGRR
LLIAGKDETIYDAKTPRLRTTPNYTAYVKIAEGCDHRCAFCAIPLIRGSFRSRAIEDIVT
EARDLAESGVREIVLIAQDSANYGLDRYKKPMLPALLRELAKIEKLAWIRVLYSYPKYFT
DELIDVFATEPKVVKYVDLPLQHAHNAVLRSMNRPDTRESVEKLIQKLRERIPGVAIRST
FIVGFPGETDTHYQTLRAFVEKQRFDKVGIFTYSEEEDTPAAAMPKKVSEEVMQERYHDL
MSLQSKISEEINIGLEGHETDVLIEGRDTEQQSIAVGRSYREAPEVDGQIYLEGDTESYV
GEIVRVRLLQGFTYDIVGERVK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagcaggttttatcagtctcggttgtgcgaagaatctcgtggatacagaggttatg
ctcggaattatgcaggagcatggcattgagatcaccaatgagccggcagaggcggatatt
ctgattgtcaacacctgcgcattcatccagtctgcaaaggaagagtccattactacggtt
cttggtatggcggactataaggaaacgggacgctgccgcagtcttattgtggcaggctgc
cttggtcagcgctatgggcagcagcttcttgacgaaattcctgaggcaaatgccattatc
ggtacaggggcatggagccgtatcatggaggtcattcaagagacgctgaaagggcggcgc
ctcttgattgcgggcaaggatgagaccatctatgatgccaagaccccgcgtctgcgtacg
accccaaactataccgcctatgtcaaaattgctgaaggatgtgatcatcgctgtgcgttc
tgcgcgattccgctgattcgcggcagcttccgcagccgtgcgattgaggacattgtgacc
gaggcgcgggatctggcagagagcggtgtacgtgagatcgtcctgattgcccaggacagt
gcaaactatgggctggatcgctacaagaagccgatgcttcctgcacttcttcgggagttg
gcgaagatcgaaaagctcgcatggattcgtgttctctacagttatccgaaatactttacg
gatgagcttattgacgtgtttgcgaccgagccaaaggtcgttaaatacgttgatcttccg
cttcagcacgcacacaatgcggttctgcgttcgatgaaccgccctgatacgcgcgagtct
gtagagaagctgattcaaaagctgcgtgaacgtatcccgggagtagcgattcgatcaaca
tttattgttgggtttcccggtgaaacggatacacattaccagacacttcgcgcctttgtg
gaaaaacaacgttttgataaagttggaatttttacctattccgaggaggaggatacgcct
gcagcagcgatgccgaagaaggtttccgaggaggtcatgcaggagcgctatcacgattta
atgagcctccagagcaagatctccgaggagatcaatatcggattggaagggcatgaaaca
gacgtgctgatcgagggtcgtgatacagagcagcaatcgattgctgttgggcgttcttat
cgtgaggcaccggaagtcgatgggcagatctatctcgaaggcgatacagagagttatgtc
ggtgagatcgttcgtgtccgccttctccaaggatttacctatgacatcgttggtgaaagg
gtaaaatga
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