Selenomonas dianae: QU667_05920
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Entry
QU667_05920 CDS
T09257
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sdia
Selenomonas dianae
Brite
KEGG Orthology (KO) [BR:
sdia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdia03400
]
QU667_05920
Enzymes [BR:
sdia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QU667_05920
DNA repair and recombination proteins [BR:
sdia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QU667_05920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
PhoH
AAA_22
UvrD-helicase
AAA_19
DUF7423
Motif
Other DBs
NCBI-ProteinID:
WLD81385
LinkDB
All DBs
Position
complement(1208865..1212410)
Genome browser
AA seq
1181 aa
AA seq
DB search
MTAKLEFIIGRAGTGKTHTCLASMTKALEHEPLGRQRILLVPEHMTYAAERMLAESLTHS
AGFLQAYVFGFRRLARQVLIETGGAHLPRISDIGRRILLKDILLKHEKELSVFVRSIGKH
GFTETLGRTIAELKRYRLTTDVLRAAADDTHTQGRLSQKLKELALIMDDLSARMEGRLTD
QTDRMERLAAQLKEAPFLRGAEIWVDGFDFFNPQEMAVFHELFRTADTVHISLTMDGRRS
GNRVQVNLPENIRDTGLFARSYQTMQALTQLLAEIDPTAAPEIRLMEEQQRAQKPSLAAM
ERHLFGHERLVPITDHALKLVEAANPRLEAEAVASDVLRLARDEGYRYREIAVLVRDMDT
YADLLLPAFSDCGIPCHLDAKRPSTHHPLAELLRAAAQTAWRGWGYDTVFRALRTGFFPV
VTKGAEQDGFSCGDWEEAVDRLENYCLAFGIRSENQWTATEDWDFVRRTIPEDARATEQN
AARIAEETTLDAIRRRIATPLSLLTQHLRREESTAQERTLALYKFLTKLDVPQTLEVWRA
AADAEGRLADAAAHRQIWASCMTLLEQLVEVSGDEDLSARDFEELLEDGLDALEIALIPP
GLDHVTIASFDQNSLAGIRAAYIVGANAGMMPRAGTSQGVLSDADRLSIRESLEHTKHTI
SGGSHEQSFLERYQLYRGFTEAREYLWISYALSSADGAALAPSPLIARLRTICPTVLSIP
LAMVEREDDLVLSAPHPVLSSLAGALLARKERGRMRPIWGDVYNWMRSSAVMEPLLRLMV
RGLVSSPREEDQISSTTAKHLFARDGRISGSTTRLETFCQCPFRHFAMYGLGLRERDVYE
FQSNDFGTLLHEILHGYGEWVRTQHANDWCAAEPDSAAKIDELMHEAIPRIRSSVLMSRA
SYRHRIERIRCTAQQVIRHLTSWAKASSFHPLGFEVSFGRRTDDVKLQEFQLAGGATLSL
RGQIDRFDVTKARDYYLVLDYKTGGTSLLLPEIRHGLKMQLLLYLFVVRSLLHDTDSFPA
GMLYAPVVNPIIKSDVRLGDRDLQRLVAKDMVLTGMLIDDPEITQSIDAMGEHLCITFNK
DKSISKASARHIRSREEFEQLLAYLPQLIRTTAEEILRGNIQAAPYRFRDRNACTFCTYR
SICSFDPELGQGDRYREIADNAQAAMEEIAQMVCGEVTSDG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaaaacttgagttcatcatcggacgcgcaggaacggggaaaacgcacacctgc
cttgcgtcgatgacgaaggcgttggagcatgaacctctcggcagacagcgcatcctcctc
gtccccgagcacatgacctacgccgcagagcgtatgcttgccgagtcactgacacacagt
gcaggttttttgcaggcctatgtgttcggttttcgccgtcttgcgcgacaggtactcatc
gagaccggcggtgcacatctgccgcgcatcagtgatattggcagacgcattctcctaaaa
gacatcttgctcaaacacgagaaagaactctcggtctttgtgcgctccatcggcaagcac
ggctttacggagacattggggcgtaccattgccgagctcaaacgctaccgtctgaccacc
gatgttctccgtgctgccgccgatgacacacatacacaggggcggctttctcaaaaactc
aaggagctcgccctcatcatggatgatctctccgcgcgtatggagggacggctgaccgat
cagacggatcgcatggaacgccttgccgcccagttgaaggaagcgccgtttttgcgtggg
gctgagatctgggtcgacggattcgatttttttaatccgcaggaaatggcagtgttccat
gaactctttcgtacagcggataccgttcacataagcctgacgatggatggccgtcggtcg
ggcaatcgtgtacaggtcaacctccccgaaaacataagggatacggggctgttcgcacgc
tcgtatcagacgatgcaggcacttacgcagcttcttgcggagatcgacccgacggctgcg
cccgaaatacgtcttatggaggagcagcagcgtgcacaaaaaccctcgcttgcagcgatg
gaacgacatctgttcggacacgagcgactcgtcccgatcacggatcatgcgctcaagctt
gtcgaggcggcaaatccgcgccttgaggcggaggcggtcgcttctgatgtgctgcgcctt
gcacgcgacgagggctatcgctatcgtgagattgccgtcctcgtacgcgatatggatacc
tatgcggatcttcttctcccggcattttctgactgcggcatcccatgtcatctggacgca
aaacggccgagcacccatcatccgcttgccgagcttctgcgtgccgccgcacagacggca
tggcgcggctgggggtacgacactgtattccgtgccctgcgtacgggcttttttcctgtg
gtgacaaaaggggcagagcaggacggattttcctgcggcgattgggaggaggcggtcgat
cgactggaaaactactgtctggcgttcggcattcgcagtgaaaatcaatggacggcaacg
gaggactgggatttcgttcgccgtacgatcccggaggatgcgcgagcgacagagcaaaac
gctgcccgcattgccgaggagaccactcttgacgccattcgtcggcgcattgcgacaccg
ctttcgctgctgacgcagcatcttcgtcgggaggaaagtacggcgcaggaacgaaccctt
gcactttacaaattccttacgaaactggacgttccacagacccttgaggtatggagagcg
gcggcggatgccgaggggcgtcttgcggatgcggcggcgcaccgacagatctgggcttcg
tgtatgaccctcttggagcagctggtcgaggtcagcggagacgaagatctctctgcccgt
gactttgaggagctgctggaggacggtctggatgcactcgaaattgcattgatcccgccg
gggcttgaccatgtcacgatagcctccttcgaccagaacagtcttgcgggtatccgtgcc
gcctacatcgtcggcgcaaatgcgggcatgatgccgcgcgcgggtacatcgcagggcgtt
ctgtcggatgcggatcggctctccattcgtgaatccctcgaacatacgaagcatacgatc
tctggcggcagtcatgagcagagctttctggagcgctatcaactctatcgcggattcacc
gaggcacgggagtatctgtggatctcctatgcgctctcctctgcggacggcgcggcactc
gcaccgtcgcctctgatcgcgcgtctgcgcacgatttgcccgacagtgctctccattccg
ctcgccatggtagagcgggaggacgatctcgtgctctctgcgccgcatcccgtactctca
tcgctggcaggggctctgctcgcgcggaaggagcgtgggcgtatgcgccccatttggggt
gatgtctacaactggatgcgcagcagcgccgtaatggagcctctgctccgcctgatggtg
cgcggtctggtttcatcgccgcgcgaggaggatcagatctcttcgacgacggcaaagcat
ctctttgcgcgtgacggaaggatcagcggcagcacgacacgccttgagactttctgtcag
tgtccgtttcgccactttgcgatgtatggtctcggtctcagggagcgtgatgtctatgag
tttcagagcaatgactttggcacgctcctgcatgagatcctgcatggatacggtgaatgg
gtgcgtacgcaacacgcaaacgactggtgcgcggcagagccggacagcgcggcaaagatc
gatgagttgatgcacgaggccattccgcgcattcgaagttccgttctcatgagccgtgcc
agctaccgccatcggatcgaacgcattcgatgcaccgcgcagcaggtcatccgtcatttg
acttcgtgggcaaaggcatcgtcatttcatccgcttggatttgaggtcagttttggacgc
cgcacagatgatgtcaaactgcaggagtttcagcttgcgggcggggcaacactttccctg
cgcgggcagatcgatcgatttgatgtgacgaaggcgcgcgactactatctcgtcctcgac
tacaagacgggtgggacatccctgctcctgccggagattcgtcacgggttgaagatgcag
ctgctgctctatctctttgtcgtgcgcagcctcctccatgatacagacagctttccggcg
gggatgctctatgcgcctgtcgtgaatcccatcatcaagagtgatgtgcgtctgggtgac
agggatcttcaaaggctggttgcaaaggacatggtactcacggggatgctgatcgacgat
ccggagatcacacagagcatcgacgcgatgggggagcatctctgcatcaccttcaacaag
gacaaaagcatctccaaggcatcggcaaggcacatccgttcacgcgaggagttcgagcag
ctgctcgcctatctgccgcagctgatccgcacgactgccgaggagatcctgcggggcaat
atacaggctgcgccctatcgctttcgggatcgcaatgcctgtaccttctgtacctatcgc
tccatctgctcgttcgatccggagcttgggcagggggatcgttatcgggagattgcggac
aatgcacaggcagcaatggaggagattgcacaaatggtgtgcggggaggtgacgtccgat
ggctga
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