Selenomonas dianae: QU667_05945
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Entry
QU667_05945 CDS
T09257
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sdia
Selenomonas dianae
Pathway
sdia03420
Nucleotide excision repair
sdia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QU667_05945 (pcrA)
03430 Mismatch repair
QU667_05945 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdia03400
]
QU667_05945 (pcrA)
Enzymes [BR:
sdia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QU667_05945 (pcrA)
DNA repair and recombination proteins [BR:
sdia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QU667_05945 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
QU667_05945 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
AAA_14
DEAD
AAA_22
CheZ
Motif
Other DBs
NCBI-ProteinID:
WLD81390
LinkDB
All DBs
Position
complement(1219347..1221587)
Genome browser
AA seq
746 aa
AA seq
DB search
MDLFQGLNEPQQRAVACLEGPLLIVAGAGSGKTRVLTFRIANLLEHGVPPYRILAITFTN
KAAREMRDRVDTLIGESAHDVWLSTFHSFCARFLRMEIEHLGTYAKNFVIYDASDSKNLI
RECLKELNIDEKHTAPGAVQSHISDAKNRLLDVQAFAAQATDFFAEQVAKIYELYQSKLR
ANNALDFDDLLMLTVELLKKNEEICEKYQKKFQYILVDEYQDTNGAQYEITKLLAAGHRN
LCVVGDADQSIYGWRGADMRNILNFERDYPEATVILLEQNYRSTKNILAAANAVIENNLT
RKKKDLWTDNPTGDPITVYEAGTEKNEAAFIVREVERLHTMFNAKYGDIAVLYRTNAQSR
NIEEAFYATGIPYTMVGSVRFYDRREIKDIIAYLRVIYNPRDTLSLLRIINVPKRGLGQT
TLGRMMEKAAEYRISLFELITDEQLLSTIPKLSAKVKFEMEDFSALVFTYMGQLGTRPLH
EIVEDIIEESGYAAALEDDPKEDNRDRLENLREFISVAKNFEDGAEEGENGLEDFLAQIS
LISDVDETEQSDGNVTLMTFHAAKGLEFPTVFMAGMEEGLFPHSRTLLDDTEIEEERRTC
YVGITRAERRLYLTYARQRTIYGRTELSRPSRFLAEIPEELLEHKTADSFAEIGVRGRSD
VWGRGAAGGRRGYLPPPPQHTAEDGSVIRPNVAAKFTAGDAVRHSKWGDGRIVAISGEGE
DAELTIAFPGEGIKKFVQKYAPILKL
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtttcaggggctgaacgagccgcagcagagagccgtagcctgccttgaggga
cctctcctcatcgtggcgggtgcgggctccggcaagacacgcgtactgaccttccgcatt
gcaaacctcttggagcatggtgttccaccgtaccgcattcttgctataacatttaccaat
aaagccgcacgcgaaatgcgcgatcgtgtcgataccctgatcggtgaatccgcacacgat
gtatggctcagtacgtttcactccttctgtgcccgttttctccgcatggaaatcgagcat
ttgggaacgtatgcgaagaattttgtgatttatgatgcttcggacagcaaaaatctgatc
cgtgagtgtctgaaggaactgaatatcgacgagaaacatacggcgccgggagcggtacag
tcgcatatttcggacgcaaaaaatcgtctccttgatgttcaggcatttgcggcacaggcg
acagacttctttgcggagcaggtggcaaagatctatgagctctaccagtcgaaactgcgt
gcaaataatgccttggattttgatgatctcctcatgctgaccgtggaattgttgaaaaag
aacgaggaaatctgcgagaaataccaaaagaaatttcaatacatcctcgttgatgagtat
caggatacgaacggcgcacagtatgagatcacaaagctgcttgcagcggggcatcgcaac
ctctgtgtcgttggcgatgcggatcagtcgatctacgggtggcgcggtgcggatatgcgg
aatatcctgaactttgagcgcgactatccggaggcaacggtaatcctgctcgaacagaac
taccgctcgacaaagaatattctcgcggcggcaaatgcggtcattgaaaataatctgaca
cgcaagaagaaggatctttggacggataaccccacgggcgacccgatcaccgtctacgag
gccggtacggagaagaacgaggccgcattcattgtgcgtgaggtggaacgcctacacaca
atgttcaacgcgaagtatggcgatattgccgtactctatcggacgaatgcacagtcccgc
aacatcgaggaagccttttatgcgacaggcattccttacaccatggttggatcggtacgt
ttttatgaccgccgtgagatcaaggatattattgcctatctgcgtgtcatttataatccg
cgtgatacactgagcctcctgcgcatcatcaatgtgccaaagcgtggccttggacagaca
acactggggcgtatgatggagaaggcggcggaataccgcatctcgctcttcgagctgatt
acggatgagcagctgctcagtaccataccgaagctgtctgcaaaggtgaaattcgagatg
gaggatttctctgcactcgtatttacctatatggggcagctcggtacacgtccgcttcat
gagattgtcgaggacatcattgaggagtccggttatgcggccgcccttgaggacgatcca
aaggaggacaatcgcgatcggcttgagaatctgcgtgagtttatcagtgtggcaaagaac
tttgaggacggtgcagaggagggggagaacggtctggaggattttctcgctcaaatctcg
ctcatctccgatgtggatgagacggagcagtcggacggcaatgtgacgcttatgaccttc
catgcagcaaaggggctggagtttccgactgtattcatggcgggcatggaggaggggctg
tttccccattcccgaacgctgctcgacgatacggagatcgaggaggaacggcgcacctgc
tacgtcggtattacacgtgccgagcgacggctctatctcacctatgcgcgtcagcgaacc
atctacggacggacggaactgtcgcgtccctcacgattcctcgcggagataccggaggag
cttctggaacataagacagcggattcctttgccgagataggtgtgcgcggccgctccgat
gtctggggccgtggtgcggcaggcggacgccgcggctatctgccgccgccgcctcagcat
acagctgaggacgggagcgtgatccgccccaatgttgccgccaagtttacggcgggtgat
gccgtgcgccacagcaagtggggcgacgggcgtatcgtcgccatcagcggcgaaggggag
gatgcagagcttacgattgcattcccgggtgaggggatcaagaaattcgtgcagaaatat
gcgccgattttgaagctgtga
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