Selenomonas dianae: QU667_06540
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Entry
QU667_06540 CDS
T09257
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sdia
Selenomonas dianae
Brite
KEGG Orthology (KO) [BR:
sdia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdia03032
]
QU667_06540 (topA)
03400 DNA repair and recombination proteins [BR:
sdia03400
]
QU667_06540 (topA)
Enzymes [BR:
sdia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QU667_06540 (topA)
DNA replication proteins [BR:
sdia03032
]
Prokaryotic type
DNA Topoisomerases
QU667_06540 (topA)
DNA repair and recombination proteins [BR:
sdia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QU667_06540 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
WLD81497
LinkDB
All DBs
Position
complement(1321974..1324298)
Genome browser
AA seq
774 aa
AA seq
DB search
MKCTPIGALKGTDRLATLTSASKTSKSKTTKNTKTSGKKSSKKILVIVESPAKAKTIERH
LGKNYIVRASMGHLRDLPKSQFGIDVENEFLPKYINVRGKGELIRALKKEAKNADKIYLA
SDPDREGEAIAWHLAFILGVDPEKDCRIVFHEITKPAIEEAVRHPRPIRMEQVDAQQARR
MLDRIVGYKLSPLLWRKVRKGLSAGRVQSVTVRLICDREREIEAFQSEEYWTVEAKLKKG
KNSFTADVTHAHGKKLSLHSEAETRTLTDDLARQEFSVKDVKRSERRKKAAPPFTTSSLQ
QDAARKLGFTSGRTMMIAQQLYEGVVLGRHGATGLITYMRTDSTRISNLAIEEARNFLTD
TYGKEYIPTRPNIYVMGKKAQDAHEAIRPTSILRTPSDVEPYLNRDQLRLYTLIWQRFAA
SQMSAAVYDTIAAQIEAGDYRLRAHGSKLTFKGYTAVYVGAEIAKKEKDTLLPELETGDA
LALSELKPEQHFTEPPPRYNDASIVKTLEEMGIGRPSTYAPIIETIQKRGYVERREKQFR
PTELGFIVTDMLEEYFKDIVDVKFTANLEGELDEVADGTLDKNDLLRKFYVPFDETLKKA
EDVIGTVEIPDEVTDIPCDKCGRMMVVKQGRFGKFLACPGFPDCRNAKPLLRDTGVACPK
CGGKIVERKSRRGRAFFGCDRYPDCDYTTWDEPQQEKCKICGSFMQRHRYRTGRSILYCS
NEACSSRIGSPIEKELARQKAHAQAQAAKDADPPAAEKRTAVKKKTTRRKGTGA
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgcacgcctatcggcgcgttgaaaggaactgacagattggctacgctgacatct
gcatcgaaaacatccaaatcgaaaacgacaaaaaacacgaaaacatcgggaaaaaaatca
tcgaaaaaaattctggtgattgtagaatctccggcgaaggcaaagaccatcgagcgacat
ctcggaaaaaattacatcgtcagagcctccatggggcacctgcgcgacctgccgaagagc
cagttcggcattgatgtcgaaaatgaattcttgccgaaatacatcaatgtccgcggcaag
ggggagctcattcgtgcgctcaaaaaagaggcaaaaaatgcggacaagatctatctcgca
agcgaccccgaccgtgagggggaggcgattgcgtggcatctggcgtttattctcggggtt
gaccccgagaaggactgccgcattgttttccatgagattacgaagccggcgattgaggag
gcggtgcggcacccgcgtccgatccgcatggagcaggtggacgcgcagcaggcgcggcgt
atgctcgaccgcatcgtcggctacaagctctcgccgctcctctggcgcaaggtgcgaaag
gggctgtccgccggacgcgtacagtccgtgaccgtgcgcctgatctgtgatcgggagcgt
gagatcgaggcgtttcaatcggaggaatactggaccgtcgaggcgaagctgaaaaaggga
aagaactcttttacggcggatgtcacccatgcacacggaaagaagctgtcactgcacagt
gaggcagaaacaaggacgctgaccgacgatcttgcgcgacaggagttcagcgtcaaggac
gtgaagcgcagcgaacgccgcaagaaagccgctcctccgtttacgacaagctcgcttcag
caggatgcggcacgcaagctcggctttacctcgggacgtacgatgatgattgcccagcag
ctctacgagggcgttgtccttggacggcacggggcgaccggtctcatcacctatatgaga
acggattcgacacgtatctccaaccttgccattgaggaggcgaggaactttctcacggat
acctatggaaaggaatacattccgacgcgccccaatatctacgtgatgggcaagaaggca
caggatgcgcatgaggcgatccgcccgacgagcatcctgcgaaccccctccgatgtagag
ccgtatttgaaccgggatcagctgcgcctctatacactcatctggcagcgttttgcggcg
agccagatgtctgccgccgtttacgataccattgcggcgcagatcgaggcgggagattat
cggctgcgcgcacacgggtcgaaactcacgttcaagggctataccgccgtctatgtgggc
gcggagattgcaaagaaggagaaggacacacttctgccggaacttgagacgggggatgcg
ctggcactctccgaactgaagcccgaacagcacttcactgaacccccgccgcgctataac
gatgcgtccatcgtcaagacattggaggagatggggatcggtcggccgagtacctatgcg
ccgatcatcgagaccatccagaagcgcggctatgtggaacgccgcgaaaaacaatttcga
ccgacggaacttggcttcatcgtgacggatatgctcgaagaatatttcaaggacattgtc
gatgtgaagttcacggcaaatcttgagggagaactggatgaagtcgcagacggcacgctt
gacaaaaacgatttgctgcgcaaattctacgtgccgtttgacgaaacgctcaaaaaggcg
gaagatgtcatcggcacggtcgagattcccgatgaagtcacggatattccctgcgataaa
tgcggacgcatgatggtggtcaagcagggacgtttcggcaagtttcttgcctgtcccggc
ttccccgactgccgcaatgcaaagccgctcctgcgcgatacaggtgtcgcctgtcccaaa
tgcggcggcaagatcgtcgagcgcaagagccgtcgcgggcgggcattctttggctgtgac
cgttatcctgactgtgactatacaacgtgggacgaaccacagcaggagaaatgtaaaatt
tgcggttcgtttatgcagcggcaccgctatcgtacgggacgcagcatcctttattgcagc
aacgaagcgtgctcctcgcgcatcggcagccccatcgaaaaggaactggctcggcagaag
gcacacgcacaggcgcaagccgcgaaggatgctgacccacctgccgcagagaagcgtact
gccgtaaagaagaaaacaacacggcgcaaggggacaggtgcatga
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