Selenomonas dianae: QU667_10475
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Entry
QU667_10475 CDS
T09257
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sdia
Selenomonas dianae
Pathway
sdia02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdia00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QU667_10475 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdia03021
]
QU667_10475 (rpoD)
Transcription machinery [BR:
sdia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QU667_10475 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
WLD82217
LinkDB
All DBs
Position
complement(2149772..2150914)
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AA seq
380 aa
AA seq
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MQAAAVRIERDEMHQTGILNRLAAKGKTNGGTLTCTELMEALDTQTMTPDEMNTLYEKFN
DEGIEIVDDTAVEAVGDDDPPESVDAPDSDEPEIEIDLSVPEGIALDDPVRMYLKEIGRV
PLLTAEEEVELARRMEAGDERARHRLEEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLL
KAVEKFDYSKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKYIRISRQLLQE
LGRDPTPEEVAKHMGLSTSRVREIMKIAQEPVSLETPIGEEEDSHLGDFIEDEAALDPAD
AASMMLLKEQIADVLKTLAPREAEVLRLRFGLEDGRSRTLEEVGQSFGVTRERIRQIEAK
ALRKLRHPVRLRKLQGNFDL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcagcggccgtacggatcgaacgggatgagatgcaccaaacgggaatattgaat
cgacttgcggcaaaaggaaaaacaaacggaggcacactgacgtgcacagagctgatggaa
gcacttgacacacagaccatgacccccgacgaaatgaatacactgtacgaaaaattcaac
gacgaagggatcgagatcgttgacgatacagccgtagaagcggtcggggacgacgatcca
ccggagtccgtcgatgcgccggattcggatgagccggagatcgagatcgacctcagcgta
cccgagggtatcgcactcgacgaccccgtccgtatgtatctcaaggagatcggacgcgtg
ccgctgctgacggcagaggaggaggtcgagctcgcacgccggatggaggcgggcgacgag
cgtgcgcgtcaccgcctggaggaggcaaacctgcgccttgtcgtgagcatcgccaaacgc
tacgtcggacgcgggatgctctttctcgacctcatccaggagggcaacctcgggcttttg
aaggcggtcgagaaattcgattacagtaagggctacaaattcagcacgtacgcgacgtgg
tggatacggcaggcgattacgcgcgccatcgccgaccaggcacgtaccattcgcattccc
gttcacatggtcgagacgatcaacaaatacatccgcatctcgcgccagctcctgcaggaa
cttgggcgtgacccgaccccggaggaggttgcgaagcacatggggctgagcacttcgcgc
gtgcgcgagatcatgaagatcgcacaggaacccgtgtccctcgaaacgccgatcggcgag
gaggaggactcccacctcggcgacttcatcgaggatgaggcggcactcgatcccgccgat
gcagcgtcgatgatgctgctcaaggagcagatcgcggatgttctcaagaccctcgcaccg
cgcgaggcggaggtgctgcgtttgcggttcggtcttgaggacgggcgctcacgcaccctt
gaggaggtcgggcagagtttcggcgtgacgcgcgagcgcatccgccagatcgaggcgaag
gcgctccgaaagctgcggcatcccgtgcgtctgcgcaaattacaggggaattttgatctt
tga
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