Streptococcus didelphis: N1495_03755
Help
Entry
N1495_03755 CDS
T10476
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sdid Streptococcus didelphis
Pathway
sdid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N1495_03755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdid03019
]
N1495_03755
03009 Ribosome biogenesis [BR:
sdid03009
]
N1495_03755
Enzymes [BR:
sdid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N1495_03755
Messenger RNA biogenesis [BR:
sdid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N1495_03755
Ribosome biogenesis [BR:
sdid03009
]
Prokaryotic type
rRNA helicases
N1495_03755
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
WMB29993
LinkDB
All DBs
Position
713845..715449
Genome browser
AA seq
534 aa
AA seq
DB search
MKFTEFNLSEDIQSAVVTAGFEKASPIQEMTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
NKIRTNENIIQALVIAPTRELAVQSQEELFRFGRNKGVKVRSVYGGSSIDKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLEQVETLILDEADEMLNMGFLEDIEAIISRVPSERQTLLF
SATMPAPIKQIGVKFMKNPEHVQIKNKELTNVNVEQFYVLVKEQEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDEITRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKGDQIDILVATDVAA
RGLDISGVTHVYNYDITQDPESYVHRIGRTGRAGKTGESITFVSPNEMGYLSMIENLTKK
QMKPLKPATADEAFQAKKKVALKKIERDFADESIRSNFDKFKGDAVQLASEFTPEELALY
ILSLTVQDPADLPEVEIAREKPLPFKYVGGGHGNKNGKGGRSRDNRNRGGREGDRRGGGY
RGKRDDRRGKDKRDEKSGSKDFKRKPKRSASELFGKDKKSGKKDSGFVIRHKGE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagaatttaacttatcagaagacatccaatcagctgtagtaacagcaggt
tttgagaaagcgtctcctattcaggaaatgactattcctttagctttagaaggtaaggat
gtcattggtcaggcacaaactggtactggcaaaacagcagcatttggtttaccaaccttg
aataagattcgtaccaatgaaaatattattcaagcacttgtcattgccccaactcgtgaa
ctagctgttcagagtcaggaagaactcttccgttttggtcgtaataaaggtgttaaggtt
cgctcagtttatggtggatcaagtattgacaaacaaattaaggctcttaaatcaggagca
catattgttgttggaacaccaggtcgtcttttagaccttattaaacgtaaagcattaaaa
ctagaacaagtagaaacacttattctagacgaagctgatgaaatgctcaatatgggattc
ttagaagatatcgaagctattattagccgtgtgccttctgaacgtcaaaccctattattc
tcagcgactatgccagctccaatcaaacaaattggtgttaagttcatgaagaacccagag
catgtccaaattaaaaataaagaattaaccaatgttaatgttgaacaattttatgttctt
gtgaaagaacaagaaaaatttgacaccatgactcgtcttatggatgttgatcagccagaa
ttatctattgtatttggccgtactaaacgtcgtgttgatgaaattaccagaggacttaag
ctacgtggcttccgtgcagagggtatccatggagatttagatcaaaacaaacgtttacgt
gttattcgtgactttaaaggtgatcaaattgatattttagtagcaactgatgtggctgct
cgtggtctggatatttcaggtgtgactcacgtctataactatgatatcacacaggatcca
gaaagttatgttcaccgtatcggtcgtactggccgtgctggtaaaacaggtgaatcaatt
acgtttgtttctccaaatgaaatgggttacctttcaatgattgagaacctaactaagaaa
caaatgaaacctttaaaacctgcaactgctgatgaagctttccaagctaagaaaaaagtt
gcccttaaaaagattgaacgtgatttcgctgatgaaagtattcgttcaaactttgataag
tttaagggtgatgctgttcaattagcttctgagttcactcctgaagaattagccttatat
attttaagtttaacagtccaagacccagctgatctacctgaagttgaaattgctcgtgag
aaaccattaccatttaaatatgttggtgggggacacggtaacaaaaatggcaaaggtggc
agaagcagagataaccgtaaccgtggaggtcgtgaaggtgatcgccgtggtggtggatac
cgtggaaaacgtgatgatcgtcgtggtaaagataaacgtgatgaaaaatctggttctaaa
gacttcaaacgcaaacctaagcgtagtgcaagtgaactttttggtaaagataagaaatct
ggtaaaaaagattcaggttttgttatccgtcataaaggtgaataa
DBGET
integrated database retrieval system
