Streptococcus didelphis: N1495_04325
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Entry
N1495_04325 CDS
T10476
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sdid Streptococcus didelphis
Pathway
sdid03410
Base excision repair
sdid03430
Mismatch repair
sdid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N1495_04325 (recJ)
03430 Mismatch repair
N1495_04325 (recJ)
03440 Homologous recombination
N1495_04325 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdid03400
]
N1495_04325 (recJ)
DNA repair and recombination proteins [BR:
sdid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
N1495_04325 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
N1495_04325 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
N1495_04325 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
ThiG
Motif
Other DBs
NCBI-ProteinID:
WMB30066
LinkDB
All DBs
Position
841608..843809
Genome browser
AA seq
733 aa
AA seq
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MIKPKYEWKINDKKPDDGFFKLAEKKGLDHLTAELLFARNIRDEKHLDDFLTTDLSTLHD
PYLLNDMEKSVGRIRQAIENGEQILIYGDYDADGMTAASIVKETLEMIGAEALVYLPNRF
TDGYGPNLSVYKYFIEQNNVSLIITVDNGVSGHEAIAYAQSVGVDVIVTDHHSLPEYLPE
AYAIIHPEHPDANYPFKHLAGCGVAFKLACALLEGIPTEFLDLVSIGTIADMVSLQDENR
ILVKNGLQVLKNTERLGLQELMGLGQVDYDQFNEDVVGFKLAPQLNALGRLDDPNPAIEL
LTGFDEEEAANIAQFINEKNEERKNLVQNIFDQAIKMVDPQKPIQILAKEGWHPGVLGIV
AGRIMEELSQPVIVLAIEKDYAKGSARSIDAVNIFKALTSQKALLSAFGGHAGAAGMTLP
RENLEKLSDNLCQYLIDSGIDLSQKNSLQIDDDLRLDQLKLETLKNLDFLSPFGMDNKKP
VFRIKEFKLVQARLLGQDKKHLKFRITKDGFETDVLAFNKGYLFQEFQQAKGLELAVTLS
LNSWNGKISLQLMLVDARVEGLQLFDMRARNAQIPEGLPDIFEDQTSSEVLIDKIPENIQ
DLKDQLISRDLKAIYFKNRIENPYYLSGYGSKEQFARLYKTIYQFPEFDIRFKLEELSDY
LKIEKILLIKMIQIFEELHFVTISNGLVTVNKEAAKRDISESTIYQDLKALIKVQEIMAL
ATPQEIYNYLCHL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgataaagcctaaatatgaatggaaaataaatgacaagaagccagatgatggcttcttt
aagctagctgagaaaaaaggactagatcacctaacagcagaactcttatttgcccgtaat
ataagagatgaaaagcatctagatgattttttaaccactgatttatcaactttgcatgat
ccttatttgttaaatgatatggaaaaatcagttggcagaatacgtcaagccattgaaaat
ggggagcaaatcctcatctatggtgattatgatgctgatggtatgacagctgctagtatt
gtcaaagagacccttgaaatgataggtgcagaagctttggtttatttacctaatcgtttt
acagatggctatggtcctaatctaagtgtttataaatattttattgaacaaaataacgtt
tccttaattataactgttgataacggtgtttctggccatgaagcaattgcttatgctcag
agtgtgggagtagatgttattgtcacagatcatcatagcttacctgaatatttaccagaa
gcttatgccattattcatccagaacatcctgacgctaattatccctttaaacacctagca
ggttgtggtgtggcctttaaactagcttgtgccttactagaaggtattcccactgaattt
ttagatttagtctctattgggacaattgctgatatggtcagcttacaggatgaaaatcga
atccttgttaaaaatggcttacaggtgttgaaaaatacagaacgactaggtttacaagag
ctaatgggacttggacaggttgattatgaccaatttaatgaggatgtagttggctttaaa
ctagcccctcaattgaatgcccttggccgtttagatgatccaaatcctgctatagaatta
ttaacaggctttgatgaagaagaagctgctaatattgctcaatttattaatgaaaaaaat
gaagaacgcaagaacctggttcaaaatatttttgatcaagccataaaaatggtagatcct
caaaaacccattcagatcctagcaaaagaaggttggcatccaggagttttaggaatagta
gctggtcgtatcatggaagagcttagtcaaccagtcattgtcttagctattgaaaaagat
tatgctaaagggtctgcaagaagtattgatgctgttaatatttttaaggccttgaccagt
caaaaagcattattaagtgcctttggaggacatgctggtgcagctggaatgaccttgcct
agagagaatcttgaaaagctttctgataatttatgtcaatacttaatagatagtggtatt
gatcttagtcaaaaaaatagcttgcagattgatgatgacttaaggcttgaccaattaaag
ctagaaactctcaaaaatcttgacttcttatcgccatttggtatggataataagaaaccg
gtttttcgtattaaagaattcaagcttgttcaagctcggttactaggccaagataaaaag
catttaaaatttagaattacaaaagatggctttgaaacagatgtacttgcttttaacaag
ggttaccttttccaagaatttcaacaggctaagggattagaattagccgttaccttgtct
cttaattcttggaatggaaaaataagcctgcaattaatgttggtcgatgcaagagttgaa
ggtcttcaactctttgatatgagagctagaaatgctcaaatacctgagggcctcccagat
atttttgaagatcagacaagtagcgaagttcttattgataagattccagaaaatatccag
gacttaaaagaccagttaatctcccgagatctaaaagctatttattttaaaaataggatt
gaaaacccttattacttatctggttatggtagtaaggagcagtttgcaagactctacaaa
accatctatcagtttccagaatttgatattcgttttaagttggaagaattaagtgattat
ttgaagatagaaaaaatactcctcattaagatgattcaaatttttgaggaattacatttt
gtgacaatatcgaatggtctcgtgacggttaataaagaggcagccaagagagatatttct
gagagtactatctatcaagatctaaaagccttgataaaagtacaagaaattatggcttta
gctacccctcaagaaatttataactatttatgtcatttgtag
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