Sulfurimonas diazotrophicus: WCY31_00110
Help
Entry
WCY31_00110 CDS
T11008
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sdiz Sulfurimonas diazotrophicus
Pathway
sdiz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdiz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCY31_00110 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdiz03019
]
WCY31_00110 (recQ)
03400 DNA repair and recombination proteins [BR:
sdiz03400
]
WCY31_00110 (recQ)
Enzymes [BR:
sdiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WCY31_00110 (recQ)
Messenger RNA biogenesis [BR:
sdiz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WCY31_00110 (recQ)
DNA repair and recombination proteins [BR:
sdiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WCY31_00110 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
XAU15121
LinkDB
All DBs
Position
21266..23059
Genome browser
AA seq
597 aa
AA seq
DB search
MPDHATDKYSVLKDRFGHNAFRPLQEEAVDAILAGRDLLMILPTGGGKSLSYQLPALLME
GTTVVISPLLALMHDQVQSLKAQGMRAEMLSSMQTAEESGEIVRRLYAGEIDFLYLSPER
LNTEGMRSILSQIRLNYFVIDEAHCISEWGHEFRADYRALSQLRDFFPGIAIAAFTATAT
AHVREDILRLLRLNDPKVLQGQIYRNNLQITVRHRIKDGYDQLRDFLDDHKEESGIVYAF
SRKSVEAVANFLQQKGYAAAAYHAGMPTEQRNAVFHDFVHDQVRIIVATIAFGMGIDKSN
IRYVFHMSLPKTVENYYQEIGRAGRDGDHADVVMLFGAQDLIQQKRFVEMNEDEQYKAHL
MQKLGAVHRYASAETCRHQQLAEYFGDRIAPCGTHCDNCLEPEYDRRDITTEAQMLLSAV
YRTGQRFGKSYLVDVLRGSREQKVLANGHDELSVYGVGEALNKKQWLVLIDRMLEIGAVD
LNAHHGLFLTQEGLAVLKGEVPVLIRADRLNVRAKTVKTAAPESFDYDTELFEALRALRF
EIAQEHGVPPYVVFGDKTLKEMAASRPQSKAEMLEVGGVGEVKFERYGAQFLVLLQS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcacgctaccgataaatattccgtactgaaagaccgtttcggtcacaacgcc
ttccgcccgctgcaggaggaagccgttgacgccatcctcgccggacgcgacctgctgatg
atcctgcccaccggcggcgggaaatcgctctcttaccagctgccggcgctgctgatggag
ggaacgaccgtcgtcatctccccgctgctcgccctcatgcacgaccaggtccagagcctg
aaagcccaggggatgcgcgcggagatgctctcctcgatgcagacggcggaggagagcggc
gagattgtgcgccgcctctacgccggggagatcgatttcctctacctctcccccgaacgc
ctcaacacagaggggatgcgcagcatactttcccagatccggctcaactacttcgtcatt
gacgaagcgcactgtatcagcgagtgggggcatgagttccgcgccgattaccgcgccctg
tcgcagctgagggacttctttccgggaattgccatcgctgcattcaccgcgacggcgacg
gcgcacgtgcgcgaggacatcctgcgcctgctgcgtctaaacgatcccaaagtcctgcag
gggcagatctaccgcaacaatctccagatcaccgtgcgccaccgcatcaaggacgggtac
gaccagctccgggactttcttgatgaccataaggaggagagcgggatcgtctacgccttc
tcccgcaagagcgtcgaggctgtcgcgaacttcctgcaacagaaggggtatgcggcggcg
gcctaccatgccgggatgccgacggagcagcgcaacgccgtttttcacgacttcgtgcac
gatcaagtccggatcatcgtcgcgacgatcgccttcgggatgggcatcgacaagagcaat
atccgctacgtttttcacatgagcctgcccaagaccgtcgagaactactatcaggagatc
ggtcgggcggggcgtgacggcgaccatgccgacgtcgtcatgctcttcggggcccaggac
ctaatccagcagaagcggttcgtcgagatgaacgaggacgagcagtacaaggcgcacctg
atgcagaagctcggcgcggtgcaccgctacgcttcggcggagacctgccgccaccagcag
ctcgccgagtatttcggcgaccgcatcgcgccctgcgggacgcactgcgataactgtctg
gagcccgagtacgacaggcgcgacatcacgaccgaggcgcagatgcttctctcggccgtc
taccgtacggggcagcggttcggcaagagctaccttgtcgacgtcctgcgcggctcgcgg
gagcagaaggtactcgccaacgggcatgacgaactctccgtctacggggtcggcgaggcc
ctgaacaagaagcagtggcttgtgctcatcgaccggatgctcgagatcggggcggtggac
ctgaacgcgcaccacggcctctttctgacccaggagggtctggccgtgctcaagggcgag
gtaccggtgcttatccgtgccgaccgcctcaacgtccgggccaagaccgtgaaaacggcc
gcgccggaaagcttcgactacgatacggagcttttcgaggcgctgcgggccctgcgcttc
gagatcgcccaggagcacggggtgccgccctatgtcgttttcggggacaaaaccctcaag
gagatggcggcatcgcggccgcagagcaaggcagagatgctcgaggtgggcggcgtcggc
gaggtgaaattcgagcgctacggggcgcagtttttggtgctgctgcagagctga
DBGET
integrated database retrieval system
