Sulfurimonas diazotrophicus: WCY31_01180
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Entry
WCY31_01180 CDS
T11008
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sdiz Sulfurimonas diazotrophicus
Pathway
sdiz00300
Lysine biosynthesis
sdiz00470
D-Amino acid metabolism
sdiz01100
Metabolic pathways
sdiz01110
Biosynthesis of secondary metabolites
sdiz01120
Microbial metabolism in diverse environments
sdiz01230
Biosynthesis of amino acids
Module
sdiz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sdiz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WCY31_01180 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WCY31_01180 (dapF)
Enzymes [BR:
sdiz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
WCY31_01180 (dapF)
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Motif
Pfam:
DAP_epimerase
DUF4926
Motif
Other DBs
NCBI-ProteinID:
XAU16381
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Position
220876..221625
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AA seq
249 aa
AA seq
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MMIAKYSASGNDFVLFHSFIARDRSELARTLCDRQSGVGADGLIVLVPHAEHDFEWQFYN
SDGSTAEMCGNGSRACAHYAYSNGLAPANMTFLTEAGVIGAEVEGDMVQSDLTPPKILRD
DIVAGGKKWWLLDTGVPHLVTFDADMDNFDLVEARALRFEHNANVNIASVNSDGSIRVRT
YERGVEDETLACGTGMAACFYRANREELVGDKAEVYPKSGETLYLGLEEGTITFKGLVKK
TFETVLDVK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcgccaaatacagcgccagcggtaacgactttgtcctcttccacagctttatc
gcaagagaccgctccgaattggcccgtaccctctgtgaccgccagagcggcgtcggtgcc
gacgggctgatcgtcctcgtgccgcacgcagagcacgacttcgagtggcagttctacaac
agcgacggctcgacggcggagatgtgcggcaacggcagccgtgcctgcgcgcactacgcc
tacagcaacggcctggcaccggcgaacatgactttcctgacggaagcgggtgttatcggc
gccgaggtagaaggcgatatggtgcaaagcgacctgaccccgccgaagatcctccgtgac
gacatcgtcgcgggtgggaaaaagtggtggctgctcgatacgggcgtgccccacctcgtc
accttcgatgccgacatggacaatttcgacctcgtagaggcgcgtgcgctgcgctttgaa
cacaatgccaacgtcaacatcgcctctgtcaacagcgacggttccatccgggtacggact
tatgagcgcggcgtcgaggatgagacgctggcctgcgggacggggatggcggcctgtttc
taccgcgccaatcgtgaagaacttgtcggtgacaaagcggaggtctaccccaaaagcggg
gagacgctctatctcgggctggaagaggggacgattaccttcaaagggctggtgaagaag
acgtttgagacggttttggatgtgaagtaa
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