Sulfurimonas diazotrophicus: WCY31_03065
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Entry
WCY31_03065 CDS
T11008
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
sdiz Sulfurimonas diazotrophicus
Pathway
sdiz00860
Porphyrin metabolism
sdiz01100
Metabolic pathways
sdiz01110
Biosynthesis of secondary metabolites
sdiz01120
Microbial metabolism in diverse environments
sdiz01240
Biosynthesis of cofactors
Module
sdiz_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
sdiz_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
sdiz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
WCY31_03065 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdiz04147
]
WCY31_03065 (hemB)
Enzymes [BR:
sdiz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
WCY31_03065 (hemB)
Exosome [BR:
sdiz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
WCY31_03065 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
XAU15687
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All DBs
Position
592736..593701
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AA seq
321 aa
AA seq
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MFQRFRRNRLNSHLRALVREYHVRADDFIYPLFVRSGEGIKTEVASMPGVFQMSIDEAIR
ECDTLKALGIYSIILFGIPDVKDSVGSDALDENGIIATAVKAIKRAHPEMFVVTDLCFCE
YTDHGHCGIIDHVHETVDNDATLAISGQQAIIHAQAGADMIAPSGMMDGIIETLRTALDG
NGFENLPVMSYSTKFASGYYGPFRDVAESTPSFGDRATYQMDPANRREAIAESIADEMQG
ADILMVKPALAYLDIIRDIREATSLPLAVYNVSGEYAMLKHAGAAGLIDYERVMMETMLG
FKRAGADIIISYHAKEVAGLL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttccaacgtttccgccgtaaccggctcaattcccatctgcgtgctctggtacgcgaa
taccacgtccgtgcggacgattttatctatcctcttttcgtgcgttcgggcgagggcatc
aagacggaagtcgcctcgatgccgggcgttttccagatgagtatcgacgaagccatccgc
gagtgcgacacgctcaaggcactggggatctactccattatcctcttcgggattcccgac
gtcaaagactccgtgggctccgatgcgctggacgagaacggcatcatcgccacggccgtc
aaagcgatcaagcgggcccaccccgagatgttcgtcgtcacggacctctgcttctgcgaa
tacaccgaccacggccactgcgggatcatcgaccatgtgcacgagaccgttgataacgac
gcgacactcgccatctccggccagcaggcgatcatccatgcccaggcgggggcggatatg
atcgcgccttcgggcatgatggacgggatcatcgagaccctgcgcacggcacttgacggc
aacgggtttgagaacctgccggtcatgagctactcgacgaagttcgccagcggttactac
gggccgttccgcgacgttgccgaatcgacgccgtccttcggggaccgcgccacctatcag
atggaccctgccaaccgccgcgaggcgatcgccgagagcatcgcggacgagatgcagggc
gcggacatcctgatggtcaaaccggccctggcctaccttgatattatccgcgacatccgc
gaagcgacctctctgccgctcgcggtctacaacgtcagcggcgaatacgccatgctcaaa
cacgcaggagcggccgggctgattgattacgaacgggtcatgatggagacgatgctcggc
ttcaaacgcgccggcgcggacatcattatcagctaccacgccaaagaggtggcggggctg
ctgtag
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