Sulfurimonas diazotrophicus: WCY31_03305
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Entry
WCY31_03305 CDS
T11008
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sdiz Sulfurimonas diazotrophicus
Pathway
sdiz03420
Nucleotide excision repair
sdiz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
WCY31_03305
03430 Mismatch repair
WCY31_03305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdiz03400
]
WCY31_03305
Enzymes [BR:
sdiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WCY31_03305
DNA repair and recombination proteins [BR:
sdiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
WCY31_03305
MMR (mismatch excision repair)
Other MMR factors
WCY31_03305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
XAU15735
LinkDB
All DBs
Position
641137..643218
Genome browser
AA seq
693 aa
AA seq
DB search
MPLSRLNEEQYRAATASFGHNLIIASAGTGKTSTIVGRIAHLLGQGVQPHEILLLTFTNK
AAAEMVERVAAFFGAEKAGQIDAGTFHAVSYRWLKRQQGKVVLKQQRELKTLFRSVYEKR
SFHHLEGENEPYGANYLYDLYSYYQNTEMDKSFEMWITERQEEHDRFAMIYADIIDEFEE
LKTQYGFLNFNDLLLQMRKLCERMELGYKEVLVDEYQDTNALQGTLIDAMSPPSLFCVGD
YDQSIYAFNGADISIIGSFSQKYPDADVHTLSKNYRSTVPILSLANKVIAKNERIYPKQL
EVTRDHAAPPPKLLVYDELFEQYHGIAEMIGKSATEHEEIAVIFRNNSSADGIEAALREK
GIACRRRGGVSFFDAKEVKFILDIYTLLVNESDMMAFIHVFEHAKGVGSALAKELYVALQ
FLGGGSMLRGLYTPDLKISNPFEKRKLNHQLGLFDDFLELGHAGRFAEVISDKKLLKNPV
LKHPKLTKDGAKMLSQFYTLLQAIKNLSRPQNVVQKIAASDLYATVAEQLAVRRAILPDG
QVDAKLKTEALERIRRKPAVLQELAKPYKEHERFLNAMILGSQDLTQGEGVHLLSIHASK
GLEYKEVYVIDLMDGRFPNRKLMGRGGSLDEERRLFYVAVTRAKDILYLSFAKYDRIKKA
QFVPSIFLYEAGMLKEDEEYRMLVKKEEAKEDA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgcccctttcccgtctcaacgaagaacagtaccgtgccgcgaccgcatcctttggccac
aatctgattatcgcctccgccgggacgggcaagacgtcgaccattgtcgggcggattgcg
caccttctggggcagggggtgcagccccacgagatcctgctgctcacctttacgaacaag
gccgcggcggagatggtcgaacgcgttgcagcctttttcggtgcggaaaaggccgggcag
atcgacgcagggaccttccatgcggtcagctaccgctggctcaagcggcaacagggcaag
gtcgtcctcaagcagcagcgcgagctcaagaccctcttccgcagtgtttacgaaaaacgc
agtttccaccacctggagggggagaacgaaccctacggcgccaactacctctatgacctt
tactcctattaccagaatacggagatggacaagagtttcgagatgtggatcactgagcgg
caggaggaacatgaccgttttgccatgatctatgccgacatcatcgacgaattcgaagag
ctgaaaacccagtacgggtttttgaacttcaacgacctgctcctgcagatgcgcaagctc
tgcgaacggatggagctcgggtataaagaggtgcttgtcgacgagtaccaggataccaac
gccctgcaggggacgctgatcgatgcgatgagtccgccgtcgctcttctgcgtcggcgat
tatgaccagtccatctacgccttcaacggggcggacatctccattatcggctctttttcg
cagaagtaccccgatgccgacgttcataccctctcgaagaactaccgctcgacggtcccc
atcctctccctggcgaacaaagtgattgccaaaaatgagcgcatttaccccaaacagctg
gaggtgacgcgggatcatgccgcaccgccgccgaagctgctcgtgtacgacgaactcttc
gaacagtaccacggcatcgcggagatgattggcaagagtgcaaccgaacacgaagagatt
gctgtcattttccgcaacaactccagtgcggacgggatcgaggcggcactgcgggagaag
gggatcgcctgccgccggcgcggcggggtcagcttttttgacgccaaagaggtgaagttc
attctcgatatctatacgctgctcgtcaacgagagcgatatgatggctttcatccatgtg
ttcgaacatgccaaaggggtgggaagcgcgttggccaaggagctctacgtggcgctgcag
ttccttggcggcggttcgatgctgcggggtctttatacgcccgatctgaagatcagcaac
cctttcgagaaacggaaactgaaccaccagctcggactgttcgatgattttctagagctt
gggcatgccggccgttttgccgaggtgatcagcgataaaaagcttttgaagaaccccgta
ctaaagcatccgaagctgaccaaagacggggcgaaaatgctctcgcagttctataccctg
ctgcaggcgatcaaaaacctctcccgtccccagaacgtcgtacagaaaatcgcagcctcc
gatctctatgcgacggtcgcggagcagctggccgtccggcgtgccattttgcccgacggc
caggtcgatgcaaagcttaaaacggaagcattggaacgtattcgccgcaaaccggcggtg
ctccaggaattggccaagccctataaagagcatgagcgcttcctcaatgcgatgattctc
ggctcccaggacctgacccagggcgaaggggtgcatctgctcagtatccatgcgtccaaa
gggctggagtataaagaggtttatgtcatcgatctgatggacgggcgctttcccaaccgt
aaattgatgggcagaggcggaagtctggacgaggaacggcggctcttctacgtagcggtg
acccgggcgaaggatatcctctatctgagtttcgccaaatacgaccggatcaaaaaagcg
cagttcgtcccgtcgatctttctttacgaagcgggcatgctcaaagaggacgaagagtac
agaatgcttgtgaaaaaagaggaagcgaaagaagacgcgtaa
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