Sulfurimonas diazotrophicus: WCY31_08220
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Entry
WCY31_08220 CDS
T11008
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sdiz Sulfurimonas diazotrophicus
Pathway
sdiz03030
DNA replication
sdiz03430
Mismatch repair
sdiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WCY31_08220 (dnaE)
03430 Mismatch repair
WCY31_08220 (dnaE)
03440 Homologous recombination
WCY31_08220 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdiz03032
]
WCY31_08220 (dnaE)
03400 DNA repair and recombination proteins [BR:
sdiz03400
]
WCY31_08220 (dnaE)
Enzymes [BR:
sdiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WCY31_08220 (dnaE)
DNA replication proteins [BR:
sdiz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WCY31_08220 (dnaE)
DNA repair and recombination proteins [BR:
sdiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WCY31_08220 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
Motif
Other DBs
NCBI-ProteinID:
XAU14241
UniProt:
A0ABZ3H998
LinkDB
All DBs
Position
complement(1583142..1586762)
Genome browser
AA seq
1206 aa
AA seq
DB search
MSVQPFTHLHLHTEYSLLDGANKISNLAKRVKELGMTSVAMTDHGNMFGAIDFWHQMKGE
GIKPIIGMEGYIHNGETLDDKSTRQRFHICLYAKNQKGYENLMYLSSMAYIHGFYYFPRI
TKQELREHSEGLVCTSACLQGEVSWHLNTNSERNVKFGAGGYDEAKRVALEYKEIFGEDF
YLELMRHGIADQLFIDEPLLKLSQETGIKLVATNDTHYTFPDDAQYHEAFMCIGMNKLYD
DPNRLRHSVHEFYVKSPEQMQRLYADIPEALEATQEIVDKCQLELELGNPTPPNFKFTRE
YAAKEGLNIDHADDAPLGPGATADDKKKWMGAADKNDAEFFIHRCRLGLEERLKHVPQER
HEEYRARLEYEMDVINSMKFPGYMLIVWDFVAEAKRMGVAVGPGRGSAAGSLVAYALEIT
DIDPMKYDLLFERFLNPERVSMPDIDMDFMQARRGEVIDYVVRKYGRNQVAQIITFGSLL
AKGVIRDVSRVLDMPLSQADKMAKLIPEELGITLNGKKKGDDFKPGAFQKEPKIKELIDT
DPQAKRVWEFSLKLEGLKRNAGMHAAGVVISNEELWKKTPIYKPPGEETFVTQYSLNYLE
DVDLIKFDFLGLKTLDVIDNAIKLVKTRYNEVIDWNTINVDDPKVYEVIQSGATVGMFQI
ESSGMQDLNKRLKPSNFEDLIAVLALYRPGPMESGMLDDFIERKHGRKKIFYPFEEVSFD
MLKETLEPTYGMIVYQEQVMQIVQTVGGFSLGGADIVRRAMGKKKADLMEKYNREFSEGA
QQQGLDYKKASALFDLIEKFAGYGFNKSHSAAYAMVTFQTAWLKTYYPQEFMAALLTSEK
DNTDKVVKYIDEVKRMGIELSPPDINDSQLEFSATRKDDQDHILFGLGAIKGVGTSAVKS
ILEVRKDGEFTDLQDFVNRIDPQKVNKKVLESIAKAGGFDRYQYSRRALLEQMETVIETA
KDSMQARKNAAGSLFGDDADVTTVQLRLEDAPEFGLKQILEFEKETLGFYVSGHPLDDYR
EELEQLEYTLSSDLENIADGSFAIFIGKVEEITHKISKKGNQFGIVNLMDFHGNLEVMLF
SDKLEELEAMNLDEPIAFKVKVTHTEMFTRTSVTKIMSLKEVKKESKKVSTKIREVPQEP
LTLRLHLDNGVERLEELYRLVRRHPGTRPLKLNIVSKLQNVVIDSAIRVNNSIMEELAGL
SDVDVA
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccaaccctttacccacctgcacctgcacaccgaatactccctactcgacggc
gcgaacaagatcagcaatcttgccaaacgcgtcaaggagctcgggatgacctccgtggcg
atgaccgaccacggcaacatgttcggcgccatcgacttctggcaccagatgaaaggggag
gggatcaagcccatcatcggcatggaggggtatatccacaacggcgagaccctcgatgac
aaaagcacgcgccagcgttttcacatctgtctttacgcgaaaaaccagaaggggtacgag
aacctgatgtacctctcctccatggcctacatccacggcttctactacttcccgcggatc
acgaagcaggagctgcgcgagcacagcgaggggcttgtctgtacttcggcctgtctgcag
ggcgaggtgagctggcacctcaacaccaacagcgaacgtaatgtcaagttcggggccggc
ggctacgacgaggcgaagcgggtcgcgctggagtacaaggagatcttcggcgaggacttc
taccttgagttgatgcgccacggcatcgccgaccagctctttatcgacgaaccgctgctc
aagctctcccaggagacagggatcaagctcgtcgcgacgaacgatacccactacactttc
cccgacgacgcccagtaccacgaggcgttcatgtgtatcgggatgaataaactctacgac
gaccccaaccgtctgcgccactcggtccacgagttctacgtcaagagcccggagcagatg
cagcggctctacgcggatatccccgaagcgctagaggcgacccaggagatcgtcgacaag
tgccagctcgagctcgaactgggcaacccgacgccgccgaacttcaaattcacccgcgaa
tacgccgcgaaagagggactcaatatcgaccatgccgacgatgcgccgctggggcccggc
gcgacggcagacgataagaaaaagtggatgggagccgccgacaagaacgacgcggagttc
ttcatccaccgctgccgcctggggctggaagagcgtctcaaacacgtgccgcaggagcgc
cacgaggagtaccgggcgcgcctggagtacgagatggacgtcatcaactccatgaagttc
cccggctacatgctcatcgtctgggacttcgtcgccgaagccaagcggatgggagtcgcc
gtcggcccgggacgcggttccgcggcggggagcctcgtcgcctacgcgctggagattacc
gacatcgacccgatgaagtacgacctgctgttcgagcgtttcttgaaccccgaacgtgta
tcgatgcccgatatcgatatggacttcatgcaggcgcgccgcggcgaggtgatcgactac
gtcgtgcgcaaatacggccgcaaccaggtggcgcagatcatcaccttcggttccctgctg
gccaagggggtcatccgcgacgtctcccgcgtgcttgatatgccgctgagtcaggcggac
aagatggcgaagctgatccccgaagagctggggatcaccctcaacggcaagaagaaaggc
gacgatttcaaaccgggcgctttccagaaagagccgaagatcaaggaacttatcgacacg
gatccgcaggcgaagcgcgtctgggagttcagcctcaagctcgaagggctcaagcgcaat
gccgggatgcacgcggcgggggtcgttatcagcaacgaagagctctggaagaagactccc
atctacaagccgccgggggaggagaccttcgtcacccagtactcgcttaactacctcgag
gatgtcgacctgatcaagttcgacttcctcggcctcaagaccctcgacgtcatcgacaac
gcgatcaagctcgtcaagacgcgctataacgaagtgatcgactggaacacgatcaatgtg
gacgacccgaaggtctacgaagtgatccagtccggtgcgacggtcgggatgttccagatc
gaatcgagcgggatgcaggatctgaacaagcggctcaagccctccaacttcgaagacctc
attgcggtcctggcgctctaccgcccgggaccgatggagtcggggatgcttgacgacttt
atcgaacgcaagcacgggcgcaagaagatcttctaccccttcgaggaggtcagcttcgac
atgctcaaggagaccctggaaccgacctacggcatgatcgtctaccaggagcaggtcatg
cagatcgtccagaccgtcgggggcttcagcctcggcggcgcggacatcgtccggcgtgcg
atgggtaagaagaaagcggacctgatggagaagtacaaccgtgaattctccgaaggggcg
cagcaacaggggctggattacaagaaggcctccgcgctctttgacctgatcgagaagttc
gccggctacggtttcaacaagtcccactcggcggcctacgcgatggtcaccttccagacg
gcatggctcaagacctactacccgcaggagttcatggcggccctgctcacctcggagaag
gataacaccgacaaggtcgtcaagtacatcgatgaggtcaagcggatgggcattgagctg
agcccgccggacatcaacgattcgcagctcgagttcagcgccacccgcaaggatgaccag
gaccacattctcttcgggctcggcgccatcaaaggggtcgggacctccgcggtcaaatcg
atcctcgaggtgcgcaaggacggcgagttcacggacctgcaggacttcgtcaaccgcatc
gacccgcagaaggtgaacaagaaggtgctcgaatccatcgccaaggcgggaggcttcgac
cgctaccagtattcgcgccgcgcgctgctcgagcagatggaaacggtgatcgagacggcc
aaggactccatgcaggcgcgcaagaacgccgcgggcagtcttttcggcgacgacgccgac
gtcaccacggtacagctcaggctcgaagatgctccggagttcggtctcaagcagatcctc
gagttcgagaaggagaccctgggcttctacgtctccggccacccgctggatgactaccgc
gaggagctcgagcagctcgaatataccctctcgtccgacctggagaacatcgccgacggc
tccttcgccatctttatcgggaaggtcgaggagatcacgcacaagatctccaagaaaggg
aaccagtttggcatcgtcaaccttatggacttccacggcaacctcgaggtgatgcttttc
agcgacaagctcgaggagctcgaggcgatgaacctcgacgagccgatcgcctttaaggtc
aaggtgacccatacggagatgttcacccgcacgagcgtgacgaagattatgagcctcaaa
gaggtgaagaaagagagcaagaaggtcagtacgaagatccgcgaggtgccgcaggagccg
ctgaccctgcgcctgcacctggacaacggcgtcgagcgcctcgaggagctctaccgtctt
gtccgccgccacccgggcacgcgcccgctgaagctcaacatcgtctccaagctgcaaaac
gtcgtcatcgactcggctatccgcgtcaacaactccatcatggaggagctggcaggcctc
tcggacgtcgacgtggcataa
DBGET
integrated database retrieval system
