KEGG   Sulfurimonas diazotrophicus: WCY31_09310
Entry
WCY31_09310       CDS       T11008                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sdiz  Sulfurimonas diazotrophicus
Pathway
sdiz03030  DNA replication
sdiz03430  Mismatch repair
sdiz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sdiz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WCY31_09310
   03430 Mismatch repair
    WCY31_09310
   03440 Homologous recombination
    WCY31_09310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sdiz03032]
    WCY31_09310
   03400 DNA repair and recombination proteins [BR:sdiz03400]
    WCY31_09310
Enzymes [BR:sdiz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     WCY31_09310
DNA replication proteins [BR:sdiz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     WCY31_09310
DNA repair and recombination proteins [BR:sdiz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     WCY31_09310
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DEDDh_C
Other DBs
NCBI-ProteinID: XAU14446
UniProt: A0ABZ3H868
LinkDB
Position
complement(1805068..1805697)
AA seq 209 aa
MFKAWRKQRNRKRLKDEAYAFLFEPYDGDEVVVFDTETTGLDPKTDEIVSIGAVKVKGNR
ILTSETFEVYLKTSRPIPAESIEVHGIRPCDLEYALSPPEGIEKFLHFIGPRPLAGYYLE
FDVAMINRYIKPWLGVELPNPKTEVSGLYFDKKNFGIPQGNIDLRFDTILANLGVPPMGR
HNAVNDAIMTAMIFIKLNNTIKLKTGERT
NT seq 630 nt   +upstreamnt  +downstreamnt
atgttcaaggcgtggcgaaagcagcggaaccgcaaacggctgaaggatgaggcgtacgcc
tttttgtttgaaccctatgacggcgacgaggtcgtcgttttcgatacggagacgacgggg
ctcgaccccaaaacggacgagatcgtctccatcggcgcggtgaaggtgaaaggcaaccgg
atcctcacctcggagaccttcgaggtctacctgaaaacgtcccgtcccattccggcggag
agcatcgaggtacacggcataaggccctgtgatctcgagtatgcgctctccccgccggag
gggattgagaagttcctgcatttcatcggcccgcggccgctggcagggtattacctggag
tttgacgtggcgatgatcaaccgctacatcaaaccctggctcggggtggaacttcccaac
ccgaaaacagaggtctcgggcctttactttgacaaaaaaaatttcggtataccgcaagga
aacattgatttacgcttcgatacaatccttgccaacctgggagtgccccctatggggcgg
cacaacgccgtcaacgacgcgatcatgacggcaatgatctttatcaaattgaacaatacg
attaaactcaaaacaggagagagaacatga

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