Sulfurimonas diazotrophicus: WCY31_10495
Help
Entry
WCY31_10495 CDS
T11008
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sdiz Sulfurimonas diazotrophicus
Pathway
sdiz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdiz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCY31_10495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdiz03019
]
WCY31_10495
03016 Transfer RNA biogenesis [BR:
sdiz03016
]
WCY31_10495
Enzymes [BR:
sdiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
WCY31_10495
Messenger RNA biogenesis [BR:
sdiz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WCY31_10495
Transfer RNA biogenesis [BR:
sdiz03016
]
Prokaryotic type
tRNA degradation factors
WCY31_10495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
Phage_Mu_Gp27
S1_2
Motif
Other DBs
NCBI-ProteinID:
XAU14668
UniProt:
A0ABZ3H993
LinkDB
All DBs
Position
complement(2044943..2047120)
Genome browser
AA seq
725 aa
AA seq
DB search
MDYDVLVAVENRTEEYALTSVARQANGSAWLKAGNTVVLATVVIDETEFVEEGFLPLTVQ
YIEKAYAAGKIPGGFIKREAKPSDFETLTSRIIDRSLRPLFPKGFANPVQITVMVLSADE
DADLQVLGLNAASAALYVSDIDIDIPVSAVRVAKVDGEVLFNPTLPQLKNSTLDLFLAGT
ESDLLMIEMRVQGSVETELLDTMMVDPLVDPALAAETIARYRSNAMGEDDFIVLLSEAQQ
LLATANSSYAKAFAPFKKETFKLTCIAAEPDEHLMAYVREHHSDDIAAAIAQMARTERST
ALRNLRKKILDAEPEFDEHALKKAIEAVKRETVRTQVLQTQTRADGRRLDEVRPISILTN
VLPSVHSSCLFTRGQTQALVTLTIGGNKDAQMYEELTDSSAQYESFMVHYNFPGFSVGEA
SPVQPPRRRELGHGNLAKRALEPVLEAPGQTVRLVSEILESNGSSSMATVCGGYMALKAA
DLDTADPIAGVAMGLVSEGDLHMVLTDITGLEDHDGDMDFKVAGSKEGITALQMDIKLGG
ISLELLKTALYQAKAGRAHIIDIMADAENKIELSEELPGSDFFSIDPDRVADVIGQAGKT
IREIIEKFEVAIDIDKKAGNVKVTGKNREGVKGAREHIEQIVSVPKMEKPEYHVGDIVKG
RVKKIVDFGAFIELPGGVDGLLHISKISDSHVRNVSDVLSEGDDIDVEILEFKGTKISLG
RAPAA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggattatgatgtactggtagccgtcgagaatagaacggaagagtatgcgcttacaagc
gtggcccgacaggcaaacggaagcgcgtggctcaaggccggcaacacggttgtcctggcc
accgttgtcatcgacgagaccgaattcgtcgaagaggggtttctgccgctgacggtgcag
tacatcgagaaggcgtacgccgctggcaagatcccgggcgggttcatcaaacgcgaggcc
aaaccgagcgatttcgaaacgctgacctcgcgcatcatcgaccgctccctgcgtccgctc
ttccccaaaggcttcgccaacccggtccagattaccgtgatggtcctcagcgcggatgaa
gatgccgacctgcaggtgctcggcctcaacgccgcttcggcggccctgtatgtctccgac
atcgacatcgacatccccgtcagcgccgtccgcgtggcgaaggtcgacggcgaggtctta
ttcaacccgacgctgccgcagcttaaaaacagcaccctggaccttttcctcgcgggaacg
gagtcggacctgctgatgatcgagatgcgggtccagggttcggtggagacggagctgctc
gacacgatgatggtcgatcctctcgtcgatccggcgctcgccgccgagaccatcgcccgc
taccgcagcaacgcgatgggcgaggatgatttcatcgtcctgctttccgaagcccagcag
ctgctggcgacggcaaacagctcctatgcaaaggcgttcgctccgttcaagaaagagacc
ttcaagctgacctgcatcgccgcggagccggacgagcatctgatggcgtacgtcagagaa
caccacagcgacgatatcgccgcggccatcgctcaaatggcgcgcaccgagcgctccacg
gccctgcgcaatctgcgtaaaaagatcctcgacgcggaaccggagtttgacgagcacgcc
ctcaaaaaagcgatcgaagcggtcaagcgcgagacggtccgcacgcaggtcctgcagacg
cagacccgcgccgacggccgccgcctcgacgaagtacgcccgatcagcatcctgaccaac
gtgcttccctccgtccactcctcctgcctctttacccgggggcagacccaggcgctggtg
acactgaccatcggcggcaacaaagacgcccagatgtatgaggagcttaccgacagttcg
gcgcagtacgagagctttatggtgcactataacttcccgggcttcagcgtcggggaggcg
tcaccggtccagccgccgcgccgccgggagctcggacacggcaaccttgccaagcgtgcc
ctcgaaccggtcctggaagccccgggacagacggtccgtctcgtctccgagattctcgag
tccaacggctcctcctccatggcgaccgtctgcggcggttacatggcgctcaaagcggcg
gaccttgatacggccgatccgatcgccggcgtggcgatggggctggtcagcgagggggac
ctgcacatggtcctgaccgacattaccggtcttgaggaccacgacggggatatggacttc
aaggtcgcgggctccaaagaggggatcacggcgctgcagatggacatcaagctcggcgga
atctccctggaactgctcaaaacggccctctatcaggcgaaggcgggacgcgcccacatc
atcgatattatggccgacgccgagaacaagatcgaactgagcgaggaactgcccggcagc
gatttcttcagcatcgatcccgaccgtgtcgccgatgtcatcggccaggcgggcaagacg
atcagagagatcatcgaaaagttcgaggtcgcgattgatatcgacaagaaagccggcaac
gtgaaggtgacgggcaagaaccgcgaaggggtcaagggggcgcgcgagcatatcgagcag
atcgtctccgtaccgaagatggaaaaacccgagtaccacgtcggtgacatcgtcaagggg
cgggtcaagaagatcgtcgatttcggcgccttcatcgaactgcccggcggcgtcgacggc
ctgctgcacatctccaaaatctccgattcgcacgtgcgcaacgtttccgatgtcctgagc
gagggggacgacatcgacgtcgagatcctcgagttcaaagggaccaagatcagcctcggc
cgcgcaccggccgcctaa
DBGET
integrated database retrieval system
