Sulfurimonas diazotrophicus: WCY31_12315
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Entry
WCY31_12315 CDS
T11008
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sdiz Sulfurimonas diazotrophicus
Pathway
sdiz03410
Base excision repair
sdiz03430
Mismatch repair
sdiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WCY31_12315 (recJ)
03430 Mismatch repair
WCY31_12315 (recJ)
03440 Homologous recombination
WCY31_12315 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdiz03400
]
WCY31_12315 (recJ)
DNA repair and recombination proteins [BR:
sdiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
WCY31_12315 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
WCY31_12315 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WCY31_12315 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
XAU15011
UniProt:
A0ABZ3H905
LinkDB
All DBs
Position
complement(2408324..2409922)
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AA seq
532 aa
AA seq
DB search
MPKAPDAPLLDKRALEALLRSRFASGFSKLSDIPDPAGLTDASKAAKRIADAIRKGERIA
LVGDYDVDGVTATAITTLFFRQIPYPLEVTIPNRFTDGYGVSERVLERIDADVVFTVDNG
INAFAAAEVCKARGIDLIITDHHTPSEKLPDAYAVVDPKRADDHYAFPEICGAQVAWLLM
ALIKKELGLSIDMGQFLELLALAIIADVMPLMGINRAIVQAGLAQMERSARPFSVIVREA
LGKTKLGAEDIGFQIAPRINAAGRLEDASLALELLIAPDEKTAFRQFELLTQLNVMRKAI
EAEATEEAIALVRPDDRVIVVAHEGWHEGVVGIVAARLVQRFEKPTIVLSIEEGRAKGSA
RSLGNVSIYDLIASQEGLLEKFGGHKMAAGLSLRAEDVDAFRAGINTEAATLDPEEFLPV
EEIVGQLDTGSVDFELLEILERYEPYGEGNPRPRFLARDAEVVGIRYLGSDGDHSKVSLR
LFRHERETYDLMAFRRKLERPESGRLTCSYTLARNEWGGRVSIQMMLERLYG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggcgcctgacgctccgctgctggacaagcgtgccctggaggcactgctgcgt
tcgcgttttgcttccggtttttccaaactctccgatatccccgaccccgccggtctgacc
gatgcttcaaaggccgcgaaacggatcgccgatgccattcgcaaaggcgaacgcatcgcc
ctggtgggggattacgacgtcgacggggtgaccgccacggcgattacgactctctttttc
cggcagatcccctatcccctcgaggtgaccatacccaaccgtttcacggacggctacggg
gtttccgaacgcgtgctcgaacgcattgacgccgacgtcgtgtttaccgtcgacaacggc
atcaacgccttcgcggcggcagaggtgtgcaaagcgcgcggcatcgacctgatcatcacc
gaccaccatacgccttcggagaaactgcccgacgcctacgccgtcgttgatccgaagcgc
gctgacgatcactacgctttcccggagatctgcggggcgcaggtggcgtggctgctgatg
gcgctgatcaagaaggagctggggctctccatcgatatggggcagttcctcgaactcctt
gccctggcgatcatcgccgatgtaatgccgcttatgggcatcaaccgtgcgatcgtccag
gcggggctcgcccagatggagcgctccgcccgtcccttctccgttatcgtccgcgaagca
ttgggaaaaacgaaactgggggccgaggatatcggtttccagatcgcgccgcgcatcaat
gccgccggccgcctggaggacgcttctttagccctggaactgttgattgcaccggatgag
aagacggctttcaggcagtttgaactcctgacgcagctcaacgtcatgcgcaaggctatc
gaggcagaggcgacggaggaggccatcgccctggtccggcccgacgaccgggtgatcgtc
gtcgcccacgaagggtggcacgagggggttgtgggcatcgtcgccgcgcgtctggtgcag
cggtttgaaaagccgaccatcgtgctcagcatcgaggagggacgggccaaagggagtgcg
cgttcgctcggcaacgtcagcatctacgacctgatcgcttcgcaggaggggctgctcgag
aagttcggcggccacaagatggcggcgggactctccctgcgtgccgaggatgtcgacgcc
ttccgcgccgggatcaacaccgaagcggcaacgctcgacccggaggagttcctgccggtc
gaagagatcgtcggacagctcgacacgggcagcgtggattttgaactgctggagatcctg
gagcgctacgagccctacggcgagggcaacccccgcccccgctttctggcacgggatgcc
gaggtcgtcggcatccgctacctcggcagcgacggagaccactccaaggtcagtctgcgg
cttttccggcacgaacgcgagacatatgaccttatggccttccggcgaaagctggagcgg
cccgagagcggccgtctcacctgcagctataccctggcccgcaacgaatggggcggccgg
gtctccatccagatgatgcttgaacgcctctacggctag
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