Sphingobacterium daejeonense: NCTC13534_00048
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Entry
NCTC13534_00048 CDS
T06632
Symbol
gcvP
Name
(GenBank) Glycine dehydrogenase [decarboxylating]
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj00260
Glycine, serine and threonine metabolism
sdj00630
Glyoxylate and dicarboxylate metabolism
sdj00670
One carbon pool by folate
sdj00785
Lipoic acid metabolism
sdj01100
Metabolic pathways
sdj01110
Biosynthesis of secondary metabolites
sdj01200
Carbon metabolism
Module
sdj_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NCTC13534_00048 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCTC13534_00048 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NCTC13534_00048 (gcvP)
00670 One carbon pool by folate
NCTC13534_00048 (gcvP)
Enzymes [BR:
sdj01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
NCTC13534_00048 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
VTP86250
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All DBs
Position
1:38657..41530
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AA seq
957 aa
AA seq
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MSNVFYQEKFEDRHNGPSSAQVEEMLNVLGVGSVDELIEQTVPAQIRKKQALNLPPALSE
VAYLEKIAQIAEKNKVFKSYIGQGYNDVILPGVIQRNVFENPGWYTQYTPYQAEIAQGRL
QALLNFQTMVSDLTGLEIANASLLDEATAAAEGMFMLYSTRKNKDANVFLVTPNVYPQTL
DVLQTRAVPFGVEIRVADLTVENLTDDVFATFVQYPAADGTVNDYKEFAAYAHDKDITVC
VATDLMSLALLTPPGEWGADVVVGNSQRFGVPMGFGGPHAAFFATKDSYKRNIPGRIIGV
TSDSNGEYALRMALQTREQHIRRDKASSNICTAQALLAIMASFYAVYHGPQGIKNIAQRI
NDLTKLTDKAIQALGYKQVNKSYFDTLRFELGEEVGGLKSEALNNEVNFFYQDGTVGISI
DETTTFEDIQTIVKVFAKIKGKSANDVDLESLVKEIGTSIPEELERSSEYLTHPVFNSYH
SESEMLRYIKSLEAKDLSLCHSMIPLGSCTMKLNATTEMVPVTWARFGGLHPFAPADQTG
GYMQLINELNDWLCEITGFAKMSFQPNSGAQGEYAGLMVIRAYHHSRGDFERNICLIPAS
AHGTNPASASMAGLKVVVVKCDERGNIDVEDLRAKATEHAAHLNSLMVTYPSTHGVFEEP
IIEICNIIHENGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGP
IGVAEHLVPFLPNHEIIEISGEEGISAVSAAPFGSASILVISHAYIAMMGAEGLTNATKT
AILNANYIKARLEQHYPVLYAGANGRCAHEMILDCRAFKNAGIEVADIAKRLMDYGFHAP
TVSFPVAGTLMVEPTESESKAELDRFCDALIAIRSEIAAVESGDADQKDNVLKNAPHTAR
VVTADEWDRPYSRQTAAYPIEYLRVNKFWPSVGRVNDSQGDRTLICSCPPMEAYAEI
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtattttaccaagaaaaatttgaggatcgtcataatggtcctagctctgcc
caagtagaggaaatgttaaacgtgcttggtgttgggtcagtagatgaactgatcgagcag
accgttcctgcacaaatccgcaagaaacaagctttaaatcttcctccagcgcttagcgaa
gttgcttatttggaaaaaatcgctcaaatagcagaaaaaaacaaggttttcaagtcgtat
atcggtcaaggatataatgatgtaatccttccaggagttattcaacgtaatgttttcgag
aatccaggatggtatacacaatatacaccataccaagctgaaatcgctcaaggacgtctt
caagcattattaaacttccaaacaatggtttcggacttaacaggtttggaaatcgcgaat
gcatccttattggatgaggctactgcagcagcagaaggtatgtttatgctgtacagcact
cgtaagaataaagatgctaatgtcttcttggttactccaaatgtttaccctcaaacttta
gacgttttacaaactagagctgttccatttggtgttgagatccgtgttgctgacctaaca
gtcgaaaatctgactgacgatgtgtttgcaacatttgtacaatatccagctgccgacggt
actgtaaatgactataaagaatttgctgcatatgctcatgataaagatatcacggtttgt
gtggctacagatttaatgtctttggcattattgacgcctccaggagaatggggtgctgat
gttgtggtaggtaactcacaacgctttggtgtaccaatgggatttggtggacctcacgca
gcatttttcgctactaaagatagctacaaacgtaatattccaggaagaatcattggcgta
acttctgattcgaacggtgaatatgcattgcgtatggccttacagacacgtgaacaacat
attcgtagagataaagcttcttccaacatctgtactgctcaagctctattggctattatg
gcatcattctacgctgtatatcatggtcctcaaggcatcaaaaatattgctcagcgcatc
aacgatctgaccaaactgactgataaagctattcaagcattaggatacaaacaagtaaat
aaatcttactttgatactcttcgttttgaattaggtgaagaagttggtggattgaaaagt
gaagctttgaacaatgaagtaaatttcttctaccaagatggtactgtaggaatttcaatc
gatgaaacaacaacttttgaagatatccagactattgttaaggtatttgctaaaatcaaa
ggaaaatctgctaatgatgtagatttggaatcattggttaaggagatcggtacttctatt
cctgaggaattggaaagatcttcagaatacttaacccaccctgtatttaacagctaccac
tcagaaagtgagatgctacgttatatcaagtctcttgaggcaaaagatctttctttgtgt
cattctatgattcctttgggatcatgtacaatgaaattgaatgcaacaacagagatggtt
cctgtgacttgggcacgttttggaggcttgcatccatttgcgccagctgaccaaacagga
ggatatatgcaattgatcaatgaattaaacgattggttgtgtgagattactggttttgct
aagatgtcattccaaccaaactcaggtgctcaaggtgaatatgctggattaatggtaatc
cgtgcttatcaccatagccgtggtgactttgagagaaacatctgtttgattcctgcttct
gcgcatggtacaaacccagcttctgcatcgatggcaggattaaaagttgtggttgttaaa
tgtgacgaacgaggaaatattgatgttgaggatttaagagcgaaagcaactgagcatgct
gctcacttaaattcattaatggttacttatccatctactcacggtgtatttgaggagcct
attattgagatctgtaatatcatacatgaaaatggtggtcaggtatatatggacggtgca
aatatgaatgctcaggtaggcttgacaagtcctggatttatcggagctgacgtttgtcac
ttaaacttgcacaagacattctgtattccacatggtggtggtggtccaggtatgggtcct
atcggtgtagcggaacacttggttcctttcttgcctaaccatgagattatagagatttca
ggagaagaaggtatctctgcagtttctgctgctccatttggttctgcttcaattttagtt
atttctcatgcatatatcgctatgatgggtgctgaaggattaaccaatgcaaccaaaaca
gcaatcttgaacgcaaattatattaaagctcgtttagagcaacactacccagtattatat
gctggtgcgaatggtcgttgtgcacacgagatgattttggattgtcgtgccttcaaaaat
gccggaatcgaagttgccgatatcgctaagcgtttaatggactatggtttccatgctcca
actgtttcattccctgttgctggtaccttaatggttgagccaacggagtctgagtctaaa
gcagagttagacaggttctgtgatgcattgatcgctatccgttctgaaattgctgcggtt
gaaagtggtgatgctgatcaaaaagacaatgtcttgaaaaatgctccacacactgcaaga
gtagtaactgcagacgaatgggacagaccatattcacgtcaaactgctgcttatcctatt
gagtacttaagagtcaacaaattctggccttcagtaggtcgtgttaatgattctcaaggt
gacagaacattgatctgttcatgtcctccaatggaagcatacgcagagatttaa
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