Sphingobacterium daejeonense: NCTC13534_00165
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Entry
NCTC13534_00165 CDS
T06632
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sdj
Sphingobacterium daejeonense
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdj03016
]
NCTC13534_00165 (truA)
Enzymes [BR:
sdj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NCTC13534_00165 (truA)
Transfer RNA biogenesis [BR:
sdj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC13534_00165 (truA)
Prokaryotic type
NCTC13534_00165 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
VTP86845
LinkDB
All DBs
Position
1:complement(155369..156130)
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AA seq
253 aa
AA seq
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MVEDQMPRYFLEISYNGTAYHGWQIQENAVSVQEKLNQALAILLREEVETIGAGRTDTGV
HAKQLFVHFSHPSSVLQNKEKFVHSLNALLPFDISAKRLIEVSRDAHARFDATQRSYEYH
VHFQKDPFLHQFSWQLRDRPDIEKMNIAAQDLLGKQDFSCFSKSNTQVFTNNCDIKCAEW
VWDGEKLIFHITADRFLRNMVRAIVGTLMEIGLGKKPIEHIKAVIQSKDRSKAGTSVPAC
GLYLTEVAYPYID
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagatcaaatgccgagatactttttagaaatttcctataatggtactgcttat
catggatggcaaatccaggagaatgctgtatctgtacaagaaaagctgaatcaagcctta
gcaatcttattgcgtgaagaagtggagactattggtgctggaagaacggataccggagtt
catgccaaacaattgtttgtacatttttcacatccgtcttcagtgttgcagaataaggag
aaattcgttcattctttaaatgctttgcttccttttgatatttctgcaaaacgtcttatt
gaggtttcaagagatgcacatgcacgatttgatgctacccaaaggagttatgaatatcat
gttcattttcaaaaagatccattcttacatcagttctcttggcaattaagggatagaccg
gatatagaaaaaatgaacatagctgcgcaagatttgttaggtaagcaggatttttcttgt
ttcagcaaatctaacacacaagtattcacgaataattgcgatattaaatgtgcagaatgg
gtgtgggatggtgagaaattgattttccatattacagcggatcgttttcttcggaatatg
gttcgtgcaatcgttggtacattaatggaaatcggcctaggcaagaaacctatagaacat
attaaagcggtaattcagagtaaggatagatccaaagctggaacttcagttcctgcctgc
ggtctatatctaacagaagtggcttatccttatatagattaa
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