Sphingobacterium daejeonense: NCTC13534_00188
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Entry
NCTC13534_00188 CDS
T06632
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC13534_00188 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdj03400
]
NCTC13534_00188 (ung)
Enzymes [BR:
sdj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NCTC13534_00188 (ung)
DNA repair and recombination proteins [BR:
sdj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC13534_00188 (ung)
Prokaryotic type
NCTC13534_00188 (ung)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
VTP86987
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All DBs
Position
1:complement(175099..175626)
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AA seq
175 aa
AA seq
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MSERFDSSWDSIIKPLFQTSKLQELSEFVRNERSLHQVFPSADLVFNAFRLTPLNNLKVV
ILGQDPYHNDGQAHGLSFSVPAGIAIPPSLRNIYTELVTDIPGFKYPNHGNLSKWAEQGV
LLLNATLTVRAHEAGSHQKKGWEFFTDEIIKSIFRPSRKCCFSYFGEVMQSRNRL
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacgtttcgattcatcttgggattctattataaaaccattatttcagacttca
aaactacaggagctctcagaatttgtgaggaacgagcggagtttacatcaggtttttccg
tcggcagacttggttttcaatgcttttcggctgactccgttgaacaacctgaaggttgta
attttgggtcaggatccttatcataatgatggtcaggcgcatggtctatcgttttctgtt
cctgctgggattgcaattccaccaagcttgagaaatatttatactgaattggttacggat
atcccggggttcaaataccctaatcatggtaatcttagcaaatgggcagaacaaggtgtc
ttattgctgaacgccacgcttactgttagggcacatgaagctggttctcaccaaaagaaa
ggttgggaattttttaccgatgagattataaaatccattttcagaccaagcagaaaatgt
tgtttttcttactttggggaagttatgcaatcaagaaatcggctctga
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