Sphingobacterium daejeonense: NCTC13534_00337
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Entry
NCTC13534_00337 CDS
T06632
Symbol
ybbD
Name
(GenBank) beta-hexosaminidase
KO
K01207
beta-N-acetylhexosaminidase [EC:
3.2.1.52
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj00520
Amino sugar and nucleotide sugar metabolism
sdj01100
Metabolic pathways
sdj01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
NCTC13534_00337 (ybbD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC13534_00337 (ybbD)
Enzymes [BR:
sdj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
NCTC13534_00337 (ybbD)
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Motif
Pfam:
Glyco_hydro_3
Glyco_hydro_3_C
DUF1707
Motif
Other DBs
NCBI-ProteinID:
VTP87899
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Position
1:300583..302289
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AA seq
568 aa
AA seq
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MIKKLFCIGLLSIMLISAGFAQNKPNFINFINQKHTWVDSVFNTLTPKQRIAQLFLVRAH
TNLGQKYIDSVKQVIEKEQLGGLVVFQGGPVRHANMFNQYQKVSKVPLLITFDGEWGLGM
RMPDSTISYPYQMTLGAIQNNNMLYEMGRQVARDFQRIGMHFNFAPVVDINNNSKNPVIN
FRSFGDDKYKVTAKAKAYMDGMVQGGILASLKHFPGHGDTDVDSHHDLPQLKFDKTRLDS
LELYPFRELIKDGAPSVMVAHMNIPALDATPNIPSSISKKVVTDLLRKELGFQGLTVTDA
MDMNGVKKYFPRGEADVMAIEAGHDLLEVSENSGRAIDLIEKAIKSGRISQASVDARVKK
VLAAKLWLGLNQPKVVNKNNLYQDLNTPSAQSLVQRIADAAVTLLKSERGLKRFDPKRST
SIVSVGIDKAQDFEKGLALQLSDFEQFFIKGNETEEQLKELMKESKDNRQIILVIHDNRS
RPRSELELNDATKEFIDKIAGRRTISIMLTNPYALNSVDVMRSSSVLLGYQNDFFMQKAV
LKALLKQIKPEGKLPVTISENLKNGDGI
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgattaagaaactattctgtatcggattgctgtccattatgcttatttctgcgggattt
gcccaaaataagcccaatttcataaattttatcaaccaaaagcatacctgggtcgattct
gtatttaataccttgactccaaaacaacgtattgcgcagctttttttagttagagcacat
accaatcttggtcaaaaatatattgattctgtaaaacaagttattgaaaaagagcagtta
ggtggcttagtagtttttcaagggggaccggttagacatgcaaatatgttcaatcaatat
caaaaagtcagtaaagttcctttgttgataacatttgatggtgaatggggattaggaatg
cgtatgccggattctacaatttcttacccttaccaaatgacattgggagcaatccaaaac
aacaatatgttgtatgagatggggcgccaagttgctcgcgatttccaaagaattggcatg
catttcaactttgcgccagttgttgacatcaataacaattctaaaaacccagtaatcaat
ttccgttcttttggagatgataaatataaagtaactgccaaggctaaagcctatatggat
ggtatggttcaaggcggcattttggcatctttgaaacattttccaggtcatggagacaca
gatgttgactcccaccatgacctgccacagttaaaatttgacaaaactagactagacagc
ttagagttatatccattccgagaattaataaaggatggagctccatcagttatggttgct
cacatgaatattcctgcattagacgctaccccaaatattccatcatcgatctcgaagaag
gttgttactgaccttttgcgtaaggaattaggttttcaaggtttgacggtaacggatgca
atggatatgaacggcgtgaaaaaatactttcctcgaggagaagctgatgtcatggctatc
gaagccggacatgatcttttggaagtttctgaaaatagcggccgtgcaattgatcttata
gaaaaagcaatcaaatctggaagaatttctcaagcatctgttgatgctcgtgtaaagaaa
gtattggctgcaaaattatggctaggattaaatcaaccaaaagtagttaataaaaataac
ctttatcaggatttaaataccccaagtgctcaaagtcttgttcaacgtatcgctgatgcg
gcggtaactttattgaaatctgaacgtggtcttaaaagatttgatccaaaaagatctaca
tccatcgtgagtgtaggcattgataaagctcaagattttgaaaaaggacttgcccttcaa
ttgagtgacttcgaacagttctttataaaagggaatgaaaccgaagaacaactgaaagag
ttaatgaaagaatcaaaagacaatcgtcaaattatcttagttattcatgataatcgcagt
agaccacgcagtgaactggaattgaatgatgctaccaaagaatttattgacaagattgcc
ggtagaagaaccatatcgattatgttgacaaatccgtatgcattaaattcagttgatgtg
atgcgtagttcatctgttttactgggctatcaaaatgatttctttatgcaaaaagcggtt
ttaaaggcattgttaaaacaaataaaacctgaaggaaagcttccagtaactatttcagag
aatttaaagaatggagatggaatctaa
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