Sphingobacterium daejeonense: NCTC13534_00418
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Entry
NCTC13534_00418 CDS
T06632
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj00300
Lysine biosynthesis
sdj00470
D-Amino acid metabolism
sdj01100
Metabolic pathways
sdj01110
Biosynthesis of secondary metabolites
sdj01120
Microbial metabolism in diverse environments
sdj01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC13534_00418 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC13534_00418 (dapF)
Enzymes [BR:
sdj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NCTC13534_00418 (dapF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
VTP88378
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All DBs
Position
1:complement(359945..360733)
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AA seq
262 aa
AA seq
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MLKEIKFYKYQGAGNDFILIDNRNSEFDSNNHHLIQNLCDRRFGIGGDGLMLLQNINNYD
FQMLYFNADGKEGTMCGNGGRCLVAFARDLGIITNDTVFLAVDGRHEASIEDHTVNLGMI
HVQEYSMDGDAFVLNTGSPHYVEFVKDLASKNVYQDGYAIRNNSTYGEKGINVNFIEEEG
EGYFVRTFERGVEDETYACGTGAVASAMSVALQSGKDGDFTIPIRVIGGQLEISFHKKGH
HFSNVYLSGPAIQVFEGKINIS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaagaaatcaaattttataaataccaaggagcaggcaacgattttattctaatc
gacaacagaaattctgaatttgatagcaataaccatcatttaattcaaaatctgtgtgac
cgccggtttggaattggtggtgatggattgatgctccttcaaaatataaataattatgat
ttccaaatgttgtacttcaatgctgatggaaaagagggtactatgtgcggaaacggaggc
cgttgcttagttgctttcgcaagagacctcgggatcatcacgaacgatactgtctttttg
gcagttgacggaaggcatgaagctagtattgaagaccataccgtaaatcttggcatgata
cacgttcaagaatatagcatggacggagatgcctttgttttaaatacgggatcacctcac
tatgtagagtttgtaaaagatttagcaagcaaaaatgtttaccaagatggctatgctatt
agaaacaattctacctatggtgaaaaaggaatcaatgttaatttcatcgaagaagaaggt
gagggttatttcgtaagaacttttgaacgtggtgttgaagatgagacttatgcctgtgga
actggtgctgtagcatctgccatgagtgttgccctacaatccgggaaagacggcgacttt
acaatccctatccgagttattggcggccaacttgaaatttcttttcataaaaaaggtcat
cattttagcaatgtttatctttccggacctgcaattcaagtatttgaaggaaaaatcaat
atttcataa
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