Sphingobacterium daejeonense: NCTC13534_00419
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Entry
NCTC13534_00419 CDS
T06632
Symbol
mucD_1
Name
(GenBank) Probable periplasmic serine endoprotease DegP-like precursor
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj01503
Cationic antimicrobial peptide (CAMP) resistance
sdj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC13534_00419 (mucD_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC13534_00419 (mucD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdj01002
]
NCTC13534_00419 (mucD_1)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sdj03110
]
NCTC13534_00419 (mucD_1)
Enzymes [BR:
sdj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
NCTC13534_00419 (mucD_1)
Peptidases and inhibitors [BR:
sdj01002
]
Serine peptidases
Family S1: chymotrypsin family
NCTC13534_00419 (mucD_1)
Chaperones and folding catalysts [BR:
sdj03110
]
Other chaperones and cochaperones
DegP / HtrA
NCTC13534_00419 (mucD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ_6
Trypsin
PDZ
PDZ_Tricorn
Peptidase_S46
PDZ_1
Motif
Other DBs
NCBI-ProteinID:
VTP88384
LinkDB
All DBs
Position
1:360926..362467
Genome browser
AA seq
513 aa
AA seq
DB search
MKKIGATLLAAIVGGAIAVGGFKLFENKQMDNMTFEERQKVYYANNPGEEILSSTGNPDF
TQAAAAVTPGVVHIQVTMTSRGSRGGGSGSPFDMFEEFFGVPQQRGQARPQTASGSGVII
SPDGYIVTNNHVVEEADKIEVVLTDKRKFEAKVIGRDPNFDLALIKVNANNLPIVKLGNS
DNVQIGEWVLAVGYPLGLQSTVTAGIISAKGRRIGILDEPTQGRGYGNMGQQEQMISNAV
ESFLQTDAVINRGNSGGALVNARGELVGINSAIASPTGTYAGYGFAIPINLAKKIVDDFK
EFGSVKRGYVGVTFTEINDALRAEKGIDDVNGLYVRDVLKGGAAEAAGLKPGDILTKIEG
RVIYSTPDLQEYVARLRPGDKVKITYKRDGKEKDVSLTLKGEEAKAKTEDDKPSASATEI
FNKLGASFVPASDARKKELGINSGVVVSQVHRGGVFEYFGVERGLVITEVNGKPVNNVDD
VESALGSTRRDIVRITGVPEKGSTVQFNVPLRY
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataggagcaacattattagcagccatcgtgggaggagccatagccgtggga
gggtttaagctctttgaaaacaaacagatggacaacatgacgttcgaagagcgtcaaaaa
gtatattatgcaaacaacccaggggaggagatactttcttctactggaaatccagatttt
acacaagcagcagcagcagttactcccggtgttgtgcatatccaagtgaccatgactagt
cgtggctctcgtggtggtggcagcggttctcctttcgatatgttcgaagagttctttggt
gtaccacaacaacgtggacaagcgcgtccgcaaactgcatctggatctggtgtaattatc
tcgcctgacggttatattgtaacaaataaccacgtggttgaggaagcagacaaaatcgaa
gtggttttgactgacaagcgtaagtttgaagcaaaggtgatcggtagagatcctaacttt
gacttggcgttaataaaagtgaatgcgaacaacttgcctattgttaaactaggaaattct
gacaatgttcagattggagagtgggttttggcagtagggtatccactaggattacagtct
accgtgacggcaggtattatcagtgccaaaggacgtaggataggaattctagatgagccg
actcaaggccgtggttatggcaatatgggtcaacaagaacaaatgattagcaacgctgtt
gagtcgttcttgcaaactgatgctgttattaatagaggtaactcaggtggtgcattggta
aatgcaagaggtgaattggtaggtattaactctgctatcgcatctccaaccggaacttat
gctggttatggttttgcaattccaatcaacttggcgaagaaaatcgttgacgacttcaaa
gaattcggtagtgtaaaacgtggttatgtaggtgtaacatttactgagatcaacgatgca
ttgcgtgctgaaaaaggaattgatgatgtaaacggactttatgtacgtgatgtgttgaaa
ggtggagctgcggaagctgcaggacttaaaccaggtgatatcttgactaaaattgaagga
cgtgtgatttatagtactcctgatcttcaagaatatgtggcaagattgcgccctggcgat
aaagtgaaaatcacctataaacgcgatggcaaagagaaagatgtgtcattgactttgaaa
ggcgaagaagcaaaagcaaaaactgaagatgataaacctagtgcatcagctacagaaatc
ttcaataaattaggagctagctttgtgcctgcatctgatgctcgcaaaaaagaacttgga
atcaactcaggtgttgtagtttctcaagtgcacagaggtggtgtttttgaatacttcggt
gtagaaagaggcttggtaattactgaagttaatggaaaaccagtaaataatgttgatgac
gttgagtctgctttaggaagcactcgaagagacatcgtcagaataactggagtgccagaa
aaaggaagtacagtacaattcaatgttccattgaggtactaa
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