Sphingobacterium daejeonense: NCTC13534_00560
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Entry
NCTC13534_00560 CDS
T06632
Symbol
pbpD_1
Name
(GenBank) Penicillin-binding protein 4 precursor
KO
K03814
monofunctional glycosyltransferase [EC:
2.4.99.28
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj00550
Peptidoglycan biosynthesis
sdj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC13534_00560 (pbpD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sdj01003
]
NCTC13534_00560 (pbpD_1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdj01011
]
NCTC13534_00560 (pbpD_1)
Enzymes [BR:
sdj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NCTC13534_00560 (pbpD_1)
Glycosyltransferases [BR:
sdj01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NCTC13534_00560 (pbpD_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdj01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase
NCTC13534_00560 (pbpD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Motif
Other DBs
NCBI-ProteinID:
VTP89197
LinkDB
All DBs
Position
1:complement(478510..479253)
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AA seq
247 aa
AA seq
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MAIKRSPTKNKKKQTKSSFGSILKTKVLPWVIRGLIAFFVLTILWVIALRFTNPPITYLM
LKRGFERKADGKDWKLERQWLDYEDMSNNLKKAALAGEDAHFMSHNGFDTKAIREAFEKN
KEGKRLRGGSTISQQTAKNVFLWPGRSWLRKGLETYFTVLIEVFWSKRRILEVYLNVIET
GQGVYGAEAAAQYYFHKSAKSLTKKEAALIIAILPSPQKWDARRPSNYVNRRANSIARYL
NYYKIPE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcaagcgttctccaacaaagaacaagaagaaacaaaccaaatcatccttcggc
agtattttaaaaacaaaagtacttccttgggtaatccgtggattgattgctttttttgta
ttgaccatcctttgggtaatagccttgcgattcaccaaccctccaataacttatttgatg
ctaaaacgaggctttgaaagaaaagccgatggaaaagactggaaactggaacggcaatgg
ttggattatgaggatatgtccaataaccttaagaaagcggctttagcaggtgaggatgct
cactttatgtcgcataatggttttgacacaaaggctatccgagaagcatttgagaaaaat
aaagaaggcaagagattacgtgggggaagcaccatcagtcaacaaactgccaaaaatgta
ttcttatggccagggagatcttggttaaggaaaggattagaaacttattttacggtattg
atagaagtattttggagtaagagaaggattcttgaggtctatttgaatgtcattgaaact
ggtcagggagtttatggtgcagaagctgctgctcagtattatttccataaatcagctaaa
agcttgactaaaaaggaagccgcattgatcattgccattttgccaagtccgcagaaatgg
gatgccagaagaccatcaaattacgttaatcgaagagcaaacagcattgctcgatatttg
aattattataaaatccctgaatag
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