Sphingobacterium daejeonense: NCTC13534_00561
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Entry
NCTC13534_00561 CDS
T06632
Symbol
mutS_1
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCTC13534_00561 (mutS_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdj03400
]
NCTC13534_00561 (mutS_1)
DNA repair and recombination proteins [BR:
sdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NCTC13534_00561 (mutS_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_I
MutS_III
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
VTP89202
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All DBs
Position
1:479393..480964
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AA seq
523 aa
AA seq
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MAKAKKQTPLMQQYNTIKAKYPGALLLFRVGDFYETFGEDAVKAAKILGIVLTKRGNGSE
SETALAGFPHHSLETYLPKLVRAGQRVAICDQLEDPKQTKTIVKRGVTELVTPGVSYNEN
IVQQKSNNYLASIFFEKQTLGISFLDISTGEFLVAQGSVGYIDKLLQGFKPTEIIMPKKQ
YKEFLEQFGSGYYTYTLDEWPYTGDYATENLLKHFEVNSMKGFGIDRLPIGIISAGVALH
YLNETEHRNLQHISNISRIEEDRYMWLDRFTIRNLELIGSTNENATTLSDVLDETSSPMG
ARLLKRWIVMPLKDEKSINERLQVVADFYSNRELRDQLVQEIKQVGDLERLISKIGLQKA
NPREIIQLKRALYAVEKLKELCEQQESESLKIIAEQLNPCLLIREKIEKTMQAEPPVAIN
KGNVIADGVDADLDKLRKVAFGGKDYLLEIQRRESEATGIPSLKIAFNNVFGYYLEVTNT
HKDKVPTEWIRKQTLVNAERYITEELKEYEETDLRCGGKNPSH
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaagcaaagaaacaaactcctttaatgcagcaatataacaccattaaggccaaa
taccctggcgccttattgttgtttagagtgggtgatttttatgagacgtttggtgaagat
gcggttaaagccgccaagatattaggaattgtgttgactaaaaggggaaatggttccgaa
tctgaaactgcattggcgggattcccacaccattccctcgaaacttatttaccgaaatta
gttcgtgcaggacaaagagtcgccatctgtgaccagctggaagaccctaaacaaacgaag
accatcgtaaaaaggggagtcactgaattggtaacacccggagtatcatacaatgaaaac
attgtccagcaaaaatcaaataattatttagcctccatattttttgaaaaacagacgtta
gggatttctttcctggatatttcaacgggcgaattcttggtcgctcaaggatcggtaggc
tatattgataagttgcttcagggtttcaaaccaaccgaaatcatcatgcccaaaaaacaa
tacaaagagtttttggagcaattcggaagtggctattatacctataccctggatgaatgg
ccatacactggcgattatgccaccgaaaatctactgaaacatttcgaggttaattccatg
aaaggttttggtatcgatagactacctataggtattatctctgctggtgtagctttacat
tacttgaatgaaaccgaacaccgcaatttgcagcatatctccaatatctcgcgaattgaa
gaggatcgatatatgtggctggataggtttacgatccgaaatctagaattgatcggttca
accaatgagaatgctactacattgtctgatgttctggatgaaacatcatcaccaatgggc
gctagattgctgaaacgctggatagtaatgcccctgaaagatgaaaaatccatcaatgaa
agattgcaggtagtagcggatttttacagcaatagagaattaagggatcaattggttcag
gaaatcaaacaggtaggagaccttgagagattgatctcaaaaataggcttgcaaaaagcg
aatcctagagaaatcattcaattgaaaagagctttatatgctgttgaaaaactgaaggaa
ctatgtgaacagcaagaatctgaatccctcaaaataattgctgaacagttgaacccatgt
ttattgatcagggaaaagattgaaaaaacgatgcaggcggaacctcctgttgcaatcaac
aaaggaaatgtcattgctgatggagtagatgctgacctcgacaaactcaggaaggtcgct
ttcggtggaaaggattatctattggaaatccaaagaagagaatctgaagcaactggaatt
ccttcgctaaaaatagctttcaataatgtttttggatactatcttgaggttaccaatacc
cacaaggataaggttcctacagaatggatcagaaagcagactttggtaaatgctgaacga
tatattacggaagagctcaaagaatacgaagaaacagatcttaggtgcggaggaaaaaat
ccaagccattga
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