Sphingobacterium daejeonense: NCTC13534_00861
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Entry
NCTC13534_00861 CDS
T06632
Symbol
rpoB_2
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC13534_00861 (rpoB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdj03021
]
NCTC13534_00861 (rpoB_2)
Enzymes [BR:
sdj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC13534_00861 (rpoB_2)
Transcription machinery [BR:
sdj03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NCTC13534_00861 (rpoB_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
DUF4465
Motif
Other DBs
NCBI-ProteinID:
VTP90661
LinkDB
All DBs
Position
1:733208..734188
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AA seq
326 aa
AA seq
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MVKPHKVFYNVYKELLVAKGAKFTQKILTDLDYNNVNPTGWTTDDDKNDMIKIALHNYNI
KLNEELGAFKREKFAISVGDELPSGIVQMAKVYVAKKRKLKVGDKMAGRHGNKGIVARIV
RDEDMPFLEDGTPVDIVLNPLGVPSRMNLGQIYETVLGWAGQKLGVKFATPIFDGAEMDQ
VEEWVQKAELPKSGRTYLYNGLTGERFDQPTTVGVIYMLKLGHMVDDKMHARSIGPYSLI
TQQPLGGKAQFGGQRFGEMEVWALEAFGASNILQEILTVKSDDVVGRAKTYEAIVKGNNL
PTPSVPESFNVLVHELRGLGLDITLD
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaacctcacaaggtattttacaatgtttacaaagagcttttagtagctaaagga
gctaagtttactcagaagattcttacagatctagactataataacgtaaatcctacgggc
tggactactgacgacgataagaatgacatgatcaagattgcattgcataactacaacatt
aaacttaatgaggagttaggtgcattcaaacgtgagaaattcgctatttccgttggtgat
gagcttccatcaggtatcgttcaaatggctaaagtatatgtagctaagaaacgtaagctg
aaagtaggagataagatggcgggtcgtcacggtaacaaaggtatcgtagcacgtatcgtc
cgtgatgaggacatgccattcttagaagacggaacaccagttgatatcgtgttgaatcca
ctaggggtaccatctcgtatgaaccttggacagatttatgaaactgtattaggatgggct
ggacaaaaattaggtgttaagtttgctactccaatcttcgatggtgcagagatggaccaa
gtagaagagtgggtacaaaaagcggaattacctaagtcaggtcgtacttacctttacaat
ggattaactggagagcgttttgaccaacctacaacagttggagtaatctacatgttgaaa
ttaggacacatggttgatgacaaaatgcacgctcgttctattggtccttactcgttgatt
actcaacaaccattaggtggtaaggcacagtttggtggtcagcgtttcggtgagatggag
gtttgggcattagaggcatttggtgcatcaaatatcctacaagagatcttaactgttaag
tctgatgatgttgttggtcgtgcgaaaacttacgaagcaatcgtaaaaggaaacaactta
ccaactccatcggtaccagaatcgttcaacgtattggtacacgagcttcgcggattaggt
ttagatatcacattagattaa
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