Sphingobacterium daejeonense: NCTC13534_00931
Help
Entry
NCTC13534_00931 CDS
T06632
Name
(GenBank) Farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj00900
Terpenoid backbone biosynthesis
sdj01100
Metabolic pathways
sdj01110
Biosynthesis of secondary metabolites
Module
sdj_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NCTC13534_00931
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sdj01006
]
NCTC13534_00931
Enzymes [BR:
sdj01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
NCTC13534_00931
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
NCTC13534_00931
2.5.1.29 geranylgeranyl diphosphate synthase
NCTC13534_00931
Prenyltransferases [BR:
sdj01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
NCTC13534_00931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
VTP90948
LinkDB
All DBs
Position
1:792606..793583
Genome browser
AA seq
325 aa
AA seq
DB search
MFEQHPFGKLIAEYIQNTEYPKQPADLYDPIKYILSLSGKRIRPLLVLMGAKLFGKENLQ
EVVPASIAIEYFHNFSLIHDDIMDRAPLRRGKATVHQKWNDNVAILSGDALLVKAYLELG
KSPSAHIPDLLNVFNKVALEVCEGQQYDMDFEKKSNVSEDDYLNMIRLKTSVLLGGALQM
GAILANAEQEQQQLIYDFGVNLGIAFQLQDDYLDVYGNPETFGKQVGGDILCNKKTILRI
KTEQLLDEESKEEFQKLIDLDTIEDAEKVSRMKNLYAKFEVDKYAEDIKSRYMELAYNKL
ESIAVSEAQKAELRMLADTLMHRTR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacagcatccatttggcaagttgatcgcggaatatattcaaaacactgaatat
ccaaagcaacctgccgacctctatgatccaatcaagtatattctatccttatcgggcaag
cgtattaggccattacttgtgttgatgggcgccaaattatttggaaaggaaaacctacag
gaagtggttccagcaagtattgctatcgagtatttccataatttctcattgatccatgat
gatattatggatagggcaccgctaagaaggggcaaagcaactgttcatcaaaaatggaat
gacaatgtggctattctttctggagatgctttattggtaaaagcttatctagaactagga
aaaagtccttcagcacatattccggacttattgaatgtcttcaacaaagtagctttggag
gtttgcgaaggtcagcaatatgacatggatttcgaaaagaaatcaaatgtgtcagaagat
gattacttgaatatgatcagattgaagacttctgtactattgggtggagcgcttcaaatg
ggagctatacttgccaacgctgaacaggaacaacaacaattgatttatgattttggcgta
aatttaggaatcgccttccagttgcaggatgattatttggatgtatacggaaatcctgaa
acttttggaaaacaagtaggcggtgatatcctgtgcaataaaaaaacaatcttaagaatt
aagacagaacaattattggacgaagaatctaaagaagaatttcagaaacttatcgatttg
gatacaattgaggatgctgaaaaggtaagtcgtatgaaaaacttgtatgccaaattcgag
gttgacaagtatgccgaggacattaagtctagatatatggagctggcatacaataaattg
gaatcaattgccgtttcagaagcgcagaaagcagaattaaggatgttagccgatacgtta
atgcatcgtacgcgttaa
DBGET
integrated database retrieval system