Sphingobacterium daejeonense: NCTC13534_01500
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Entry
NCTC13534_01500 CDS
T06632
Symbol
gabR
Name
(GenBank) HTH-type transcriptional regulatory protein gabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
sdj
Sphingobacterium daejeonense
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdj03000
]
NCTC13534_01500 (gabR)
Transcription factors [BR:
sdj03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NCTC13534_01500 (gabR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
DUF1430
Motif
Other DBs
NCBI-ProteinID:
VTP93202
LinkDB
All DBs
Position
1:complement(1296207..1297682)
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AA seq
491 aa
AA seq
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MNSPVEIPFKSFIEIDRENTSPIYLQIVNQFVQAISKGNLSPGTKLLGSRALGELLQVHR
NTITAAYEELFAQGWVEVKPNKGTYVTSELPSLKNLEASNSSYPIKTGYEFKKSILLDSP
FEHTDCEYILNDGSPDIWLTQIEDHSRFYRTNVRRKSNREKMGYYNQEGSEFFKEQMVDY
LHGSRALKINKNNLLISRSIEMSLFIISEILLSENDYVVVADLSYFAANMIFQKSGSKIL
TVPIEDDGIDLDALEMLCKSRPIRMVYITAQQHYPTTVSLSAQKRMRLLQLAQRYGFVIV
EDDHDYDFQFDKQPLLPLATADRNGMVIYVGSFGKSLAPGFRTGFIVAPENLMIEMRKLL
GIIDRQGDVLMEQALGEMIEEGAIHRHLKKSLKVYKERRDFMAVQLSKELGNVIDFQIPN
GGLAFWIRWRNKINLFRLSQQAARNNLFIPKTLLYQHKNIQAMRIGFGNLNLMEIEKIIK
ILKLSAEQIQA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtccggttgaaataccatttaaaagttttattgaaatagacagggaaaataca
tcgcctatctatcttcagatagttaatcaatttgttcaagccatttcgaagggaaatctt
tcacctggaacaaaactactgggaagcagagctttaggagaattgctacaagtacacaga
aacactattactgcagcatacgaggaactatttgctcaagggtgggttgaagtaaaaccc
aataaaggaacatacgttacttccgaattaccgagcttaaaaaacttggaagcttcaaat
tcgtcctaccctattaaaaccgggtatgaattcaagaaatcaattcttttagacagccct
tttgaacataccgattgcgaatatatcctgaatgatggctcacctgatatttggctgacg
caaattgaagaccattccagattctataggaccaatgtgagaagaaagagcaatagggaa
aaaatggggtattacaaccaagaaggatcggagtttttcaaagagcagatggtagattat
ctacatggatcaagagcactcaaaatcaacaaaaacaatctcctcatcagtagaagcatt
gagatgagtctctttataatttcggagattttgctttctgagaatgactatgttgttgtg
gctgacctgagttatttcgctgcaaatatgattttccaaaaatcaggaagtaaaattctc
acagtacctattgaagatgatggcattgaccttgatgccttggaaatgctctgcaaatca
agacccatccgaatggtctacatcaccgcccagcaacattatccaactaccgttagcctg
agtgcacaaaaacgaatgcgtcttttgcaattagcacagcgatacggatttgttatcgta
gaagatgaccatgattatgactttcaatttgacaaacaacccttgctcccattggcaact
gctgaccggaatggaatggtaatttatgtaggatcattcggcaaatctttagctccaggg
ttccggacgggttttatagtcgctcctgaaaacctcatgattgaaatgagaaaattattg
ggaataatagatcgacaaggagatgttttaatggagcaagcattaggagaaatgatcgaa
gaaggcgcaattcacaggcatttaaaaaaatcattgaaggtatacaaagaaagaagagac
tttatggctgttcagctgagcaaagaattgggcaacgtgatcgatttccaaataccaaat
ggaggtctagcattttggattcgctggcgcaataagataaacctcttcagattgagtcaa
caagctgcaagaaacaacctctttataccaaaaaccttactttaccagcacaagaacatt
caggccatgcgaattggctttggtaatctaaatctaatggagatagaaaaaataataaag
attcttaaattatcagcagaacaaatacaggcttaa
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