Sphingobacterium daejeonense: NCTC13534_01531
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Entry
NCTC13534_01531 CDS
T06632
Symbol
vsr
Name
(GenBank) Very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sdj
Sphingobacterium daejeonense
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdj03400
]
NCTC13534_01531 (vsr)
DNA repair and recombination proteins [BR:
sdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
NCTC13534_01531 (vsr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
VTP93326
LinkDB
All DBs
Position
1:complement(1326110..1326487)
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AA seq
125 aa
AA seq
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MTNLSKCHALRNHKAFTPVKSVAKSCLKSEVKTPKPEIKLRKALWSKNIRYRIHQNELPG
TPDIVIKKYKLAIFVDGEFWHGYNWKEARENIKSNQEFWIPKIERNIQKDFASNKALRDL
GYTVF
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacctatcaaagtgccacgctttgaggaatcacaaggcttttacaccagtaaaa
agcgtagcaaaatcatgtctaaaatcagaagtaaaaactccaaaacctgagatcaaactt
cggaaagctctttggtcaaaaaatattcgttatcgaatacatcaaaatgaactcccgggg
actcctgatattgtgatcaaaaaatataagttagccatctttgtcgatggggaattttgg
cacggatacaattggaaagaagcaagagaaaatatcaaatccaatcaagaattttggatt
cccaaaattgaaagaaacattcaaaaagacttcgcaagtaataaagctctgagagattta
ggatacactgtattttag
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