Sphingobacterium daejeonense: NCTC13534_01840
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Entry
NCTC13534_01840 CDS
T06632
Symbol
topB_4
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sdj
Sphingobacterium daejeonense
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdj03032
]
NCTC13534_01840 (topB_4)
Enzymes [BR:
sdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC13534_01840 (topB_4)
DNA replication proteins [BR:
sdj03032
]
Prokaryotic type
DNA Topoisomerases
NCTC13534_01840 (topB_4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
DUF4193
Motif
Other DBs
NCBI-ProteinID:
VTP94558
LinkDB
All DBs
Position
1:complement(1584954..1586594)
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AA seq
546 aa
AA seq
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MTAWKDGKEFDGLFQAAQGRSRADWLIGINATQALSIAAGNGIYSLGRVQTPTLALICKR
YLENKNFAIKKYWQIQLLHRKENIDFKSISKTKWNEQKLAEDTLRLVQRHGTATVISVEN
KNTTEQPPLLFDLTGLQKEANKKLNLSAEQTLNIAQNLYEKKFITYPRTGSKYIPEDMWS
EIPNLVRALQDNDNFKQAISKLKWGRFNKRVVNDLRVTDHHGILITDKVPSALNADETKV
YDMIAFRLLEAISQPCIKEITDIALEVSHYDFMLKGCKVLEAGWRSIKGTFSDEDTEPIQ
DLPELKKGGELKIKEASCLEKKTKPPVLFTEAGLLSAMENAGKEIANEDERKALQGIGIG
TPATRAAIIETLFKRDYIKREKKSLVPNEKGLQVYDAVKDKRIADVAMTAEWEMALQKIE
NNEADAMDFHQSMEAYASAVTQELLSISIAGEKQHELTCQKCKAHKLLIRDKVVKCPDEA
CNWLLFRNICGVRLSLNEVENLVNKGTTSLIKGMKSKAGKKFDARIVLKDTYETSFEFDN
STYKKR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
ttgacagcctggaaagacggtaaagaatttgacggcttatttcaggctgcacaaggcaga
agccgtgccgattggctgatcggcatcaatgcgacacaggcattgagtatagccgctggc
aacggcatttattcgctgggcagggtgcaaacacctacattggctttgatttgtaaacgc
tatctggaaaataaaaatttcgctattaaaaagtattggcaaattcagctattgcaccgc
aaagagaatattgattttaagagtatctcaaaaaccaaatggaacgaacaaaagcttgcg
gaagatacattacgactggtccaaagacacggaaccgcaacggtcatatctgtggaaaac
aaaaacaccacggagcaaccccccttgctttttgatctcacaggcttgcaaaaagaagcc
aataaaaagctgaacctgtcggcagagcaaacactcaatattgcccagaacctttatgaa
aagaaatttattacctatccacgtaccggaagcaaatatatacccgaagatatgtggagt
gagatacctaatcttgtaagagcgttacaggacaatgataactttaagcaagctatttct
aaattaaaatggggtcgcttcaataaacgtgtcgtgaatgacctgcgtgtaacagaccac
cacggaatactcatcacggacaaagtgccgtctgcactcaatgccgacgaaacaaaggtt
tatgatatgattgcctttcgactgctcgaagctatctctcagccttgcattaaagaaata
acggatatagcattggaagtatcacactacgattttatgctaaaaggctgtaaagttttg
gaagcgggctggcgttcgatcaaaggaacattttcggacgaagataccgaaccgatacag
gatttgcccgaactgaaaaaaggcggtgaattgaaaatcaaagaagcctcctgtttggaa
aagaaaacaaaaccacctgtgctgtttaccgaagccggactattgtcggcaatggaaaat
gccggaaaggaaatagcgaatgaagatgagcgtaaagccttgcaaggcattggcattgga
acacccgctacaagagcggcaataatcgaaacgctttttaagcgggattatatcaagcgt
gaaaagaaatcccttgttcctaacgaaaaaggattgcaggtttatgatgctgtaaaggac
aaaagaattgccgatgtagctatgaccgccgaatgggaaatggctttgcagaagattgaa
aacaacgaggcagatgctatggattttcaccaatccatggaagcctacgcctcggccgtt
acgcaggaactgttgagcatcagcattgcgggcgaaaagcagcacgaactgacctgccaa
aagtgcaaagcccataaactgctcatcagggataaggtggtcaaatgtcccgatgaagcg
tgcaactggcttttgttccgcaatatctgcggggtacggttgagccttaacgaagtggag
aacctcgtaaacaaaggaacgaccagccttatcaaagggatgaaaagcaaagcaggcaaa
aagtttgatgcccgtatcgtactgaaagatacctatgaaacatcgtttgaatttgacaac
agcacatataaaaagagatga
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