Sphingobacterium daejeonense: NCTC13534_02080
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Entry
NCTC13534_02080 CDS
T06632
Symbol
garD
Name
(GenBank) D-galactarate dehydratase
KO
K01685
altronate hydrolase [EC:
4.2.1.7
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj00040
Pentose and glucuronate interconversions
sdj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NCTC13534_02080 (garD)
Enzymes [BR:
sdj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.7 altronate dehydratase
NCTC13534_02080 (garD)
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GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
VTP95331
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All DBs
Position
1:1779853..1781517
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AA seq
554 aa
AA seq
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MEKEKLEFLQIHPKDNVLVALRDLPVGYSLIFQGKDIVLKRPVAAKHKFTIEALEKDDEI
YMYGVLVGKVNEPLEMGELLDVNNLRHAADDFKLGNRKLEWTKPDVSAFQGRTFRGFHRS
NGSVGTANYWLVIPLVFCENRNVLTLKSALEEKLGYQVESKDYSDEVDELITRYKGGASI
DDLLAVDLSAARANKENKRLFPNVDGVKFLNHDMGCGGTRMDSDALCGLLAGYITHPNVA
GATVLSLGCQHAQASILKAEIAKRDPEFDKPLFVFEQQFEGTEQELMQKAIKSTFTGLME
ANKQEREEAGLDKLCIGLECGGSDGFSGISANPVLGFLSDMMVTMGGSVILSEFPELCGV
EQELSDRCIDEATAEKFIHLMRTYNAKAEADGSGFYMNPSPGNIRDGLITDAIKSAGAAK
KGGTSPIAAVIDYPELANGPGLNLLCTPGNDVESTTAEVAAGANIVLFTTGLGTPTGNPI
APVIKIASNSKVYNKMNDAIDLNCGTVIDGEETIEEAAHKILEYVISVASGDRIAKAVQL
GQDDFIPWRRGVSL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagagaagttggaatttttacaaatccatccaaaagacaatgtactggtagca
cttagagatttgccagttggatattctttgatatttcaagggaaagatattgtattgaag
cgacctgttgctgcgaagcataaattcaccatagaagctttggaaaaagacgatgagatt
tatatgtatggtgttttggttggaaaggtaaatgagccattagaaatgggggagttactg
gatgtgaacaatctaagacatgctgcagatgattttaaattagggaaccgaaaattggaa
tggacgaagcccgatgtttcagcatttcaaggtcgtactttcagaggttttcaccgcagt
aatggatccgtaggaacggcaaattattggttggtaattcccttggtgttttgcgagaac
agaaatgtgcttacgctgaagtcagccttggaagaaaaattgggttatcaggttgaatcg
aaagattattctgatgaggttgatgagctgatcactagatataaaggtggggcttctatt
gatgacttgctggctgtagatttaagtgcagctagggctaataaagagaacaagaggctt
tttccgaatgttgatggggttaaattcttgaaccatgacatgggttgtggtggtactcgg
atggattcagatgccctttgtgggctgttagctggatatatcacccacccaaacgttgct
ggcgccactgttctgagtttgggttgtcaacatgcgcaagcatctatcttaaaggctgaa
attgccaaaagagatcctgaatttgacaagccattgtttgtttttgaacaacaatttgag
ggtacagaacaggaattgatgcaaaaggcaatcaaatctacatttacaggtttaatggag
gcaaataagcaagagcgtgaagaagctggattagacaaattgtgtattggtttggaatgt
ggagggtctgatggtttttcagggatatccgcaaaccctgtattgggttttctttccgat
atgatggtgacgatgggcggttcagtaattttatctgaattccctgaattatgtggtgta
gagcaggagttgagtgatcgctgtattgatgaagctactgctgagaaatttatccatttg
atgcgtacttataatgcaaaggctgaagcagacggttcagggttttatatgaatccttca
ccggggaatatacgggatggattgattacggatgctatcaaatctgctggtgcggccaaa
aaaggtggtacttctccaattgctgcggtgatagattatccagaattggctaatggtcct
ggcttaaatttgctttgtactccagggaacgatgttgaaagtacaactgccgaggttgct
gcgggagccaatattgttttgtttactacaggattggggacaccaacaggaaatcctatt
gctccggtgattaaaattgcctcaaacagtaaagtttacaacaaaatgaatgatgcaatt
gacttgaactgtgggaccgttattgatggagaagaaacgattgaggaagcggctcataaa
atattggaatatgtaatttccgtggcaagtggagaccgaattgctaaggctgttcagtta
ggtcaggatgattttattccttggagacgtggtgtatcactttaa
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