Sphingobacterium daejeonense: NCTC13534_02545
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Entry
NCTC13534_02545 CDS
T06632
Name
(GenBank) Putative multidrug export ATP-binding/permease protein SAV1866
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC13534_02545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdj02000
]
NCTC13534_02545
Enzymes [BR:
sdj01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NCTC13534_02545
Transporters [BR:
sdj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NCTC13534_02545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA
AAA_29
AAA_15
AAA_5
AAA_21
AAA_25
nSTAND1
nSTAND3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
VTP96727
LinkDB
All DBs
Position
1:2166240..2168066
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AA seq
608 aa
AA seq
DB search
MKTYFRLLSFAKPIEKYAIPYIICTLIMVVFSTLNLALLAPLLNTLFNSQDTVIEPVSKP
ENLTDIMGYFNYFAYDLNDRLGPYDALKYICIVIVASVFVSNLFRYLSQRIMENLRIHTL
LNLRKSVFNNVMNLHLGYFSNQRKGDIISKIASDVQVVQFSVTGTLQVAFKEPLQLIAYL
VMLFIISAKLTLFSLLVIPVSAFFISKIVKTLKQQAQQGQRIYANMITLLEEALSGIKII
KSFNAVDFIKGRFNAENDEYATVNRRMVRRQQMGSPVSELLGVGMVAVILLYGGHLVLSG
QGDLEASEFIAYIAIFSQVMRPAKALTDAFSNIHNGIAAGERVLQLIDEKNQVADKPNAF
EIKKFDDKIEFNNVSFAYEDNDVLKNINLTIDKGETVALVGPSGGGKSTLVDLIPRFMDA
TTGEVSIDGIDVKDLQQESLRKIIGVVNQESILFNDTIFNNIAFANSEATEEQVIQAAKI
ANAHDFIMGTEHGYQTNIGDRGSKLSGGQRQRICIARAVLKNPPIMLLDEATSALDTESE
RLVQDSLYKLMENRTTVVIAHRLSTIQNADKIIVLEAGRIVEVGSHLGLIAQNGLYKRLI
DMQQFVEA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatactttagacttctttcgttcgcgaaaccaattgaaaaatatgctattcct
tatatcatatgtactttgataatggtggtgttcagcaccttgaatttagctctattagca
ccattattaaacactttatttaattctcaagatacagtaatcgaaccggtctctaagccg
gaaaacctaactgatattatggggtattttaattatttcgcctatgatcttaatgatcgc
ttaggcccatacgatgccctaaaatatatctgtattgttattgttgcttcggtttttgta
agcaatttattcaggtatctttctcaaagaataatggaaaacttaaggattcatacttta
ttgaatctgagaaaatctgttttcaataatgtaatgaacttacatcttggttatttttca
aatcaaagaaaaggggatattatctctaaaattgcatctgatgtacaggttgtgcaattt
tcagttacagggaccttacaagtagcatttaaagaaccgttacagttgattgcatacttg
gttatgctatttattatatctgctaaattaaccttgttctccttattggttattcctgtt
tcagcattttttatttccaaaattgttaagacgctgaaacaacaagcccaacaaggacaa
cgtatttatgcaaatatgataaccttattggaagaagcactttctggaattaagattatc
aaatcgttcaatgcagttgattttatcaaaggaagatttaatgctgagaatgatgaatat
gcaaccgtaaataggagaatggttcgtagacaacagatgggatcaccagtttcggagctg
ttaggtgtaggtatggtggcggtaatcttgctgtatggtggtcacttagtgttaagtggt
caaggagatcttgaggcttctgagtttatagcatacattgccatattttcacaagtgatg
agaccggctaaagctcttaccgatgctttcagcaatatccacaatggtatagctgccggt
gaaagagtattgcagttgatcgatgagaaaaatcaagtggcagataaaccgaatgcattt
gaaatcaaaaaatttgatgacaaaatcgaattcaacaatgtgtcatttgcctatgaagat
aatgacgttctgaaaaacatcaatcttacgatcgataaaggtgaaacagtagcactagtt
ggtccttccggaggtggtaaatccacgttagtggacttaattccacgatttatggacgct
actactggtgaggtttcaatcgatggaatagatgtcaaagatcttcaacaggaatctctt
cgtaaaataatcggggtagtcaatcaagagtctattttatttaacgatactattttcaac
aatatagcatttgccaattctgaggctacggaggagcaggttatacaagctgctaagatt
gcaaacgcacatgattttatcatgggtacggagcatggttatcagacgaatatcggagac
agaggttccaaattatcaggaggtcagcgtcagcgaatttgtattgctcgagcagtgctc
aaaaatccacctattatgctgttggatgaagcgacttcagctttggatacagagtcagag
cgtctggttcaggattcattatataagttaatggagaacaggacgacggttgttattgca
caccgactgagtacgattcagaatgccgacaagattatcgttcttgaagcaggcaggatt
gttgaggtaggttcacatttgggcttgatagctcaaaacggtctatacaaaagactgatt
gatatgcagcaatttgtagaagcatag
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