Sphingobacterium daejeonense: NCTC13534_02987
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Entry
NCTC13534_02987 CDS
T06632
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sdj
Sphingobacterium daejeonense
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdj03016
]
NCTC13534_02987 (truB)
Enzymes [BR:
sdj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC13534_02987 (truB)
Transfer RNA biogenesis [BR:
sdj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC13534_02987 (truB)
Prokaryotic type
NCTC13534_02987 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-ProteinID:
VTP98362
LinkDB
All DBs
Position
1:complement(2496374..2496973)
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AA seq
199 aa
AA seq
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MSNNTEGQAKPKFAFAEGEVLLIDKPLTWTSFDVVGKLRNSIKPLKVKVGHAGTLDPLAT
GLLIVCTGKMTKQIDGFQAEDKEYTGTITLGATTPSYDLETEIDQTFDISNIQDEDILNA
AAGFVGVQDQYPPVHSAIKIGGERVYEKARRGEEVELKARRVEIMEFEVVKIEMPVVHFR
IKCSKAPISVLLLMTSEKY
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataatacagaaggacaagctaagccaaaatttgcttttgcggagggtgaagta
ctattaatcgacaagccattaacttggacaagttttgatgtggtaggaaaattaaggaat
agcatcaagcctttgaaggtcaaggtgggtcatgctgggactttggatcctttagcgact
ggtttattgattgtctgtaccgggaagatgaccaaacagatcgatggttttcaagctgaa
gacaaagaatatactgggacaattactttgggagctaccacgccatcttatgacctagaa
accgaaattgatcaaacattcgatatttcaaatatccaggatgaagatatcctaaatgct
gctgctggatttgtcggcgttcaggaccaatatccacctgtgcattctgccattaagatt
ggtggtgaaagagtctatgaaaaggcacgccgaggtgaggaagtagaattaaaagctcga
agagttgaaatcatggaatttgaagttgtgaagattgaaatgcctgtggttcacttccgg
ataaagtgtagcaaagcacctatatccgttctattgctcatgacttcggaaaagtattga
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