Sphingobacterium daejeonense: NCTC13534_03212
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Entry
NCTC13534_03212 CDS
T06632
Symbol
gyrA_2
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sdj
Sphingobacterium daejeonense
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdj03032
]
NCTC13534_03212 (gyrA_2)
03400 DNA repair and recombination proteins [BR:
sdj03400
]
NCTC13534_03212 (gyrA_2)
Enzymes [BR:
sdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC13534_03212 (gyrA_2)
DNA replication proteins [BR:
sdj03032
]
Prokaryotic type
DNA Topoisomerases
NCTC13534_03212 (gyrA_2)
DNA repair and recombination proteins [BR:
sdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC13534_03212 (gyrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
VTP99242
LinkDB
All DBs
Position
1:2656673..2659237
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AA seq
854 aa
AA seq
DB search
MAEETENENNLVPAENRIIPINIEDQMKAAYIDYSMSVIVSRALPDARDGLKPVHRRVLY
GMLDLGVTSGKPYKKSARIVGDVLGKYHPHGDSSVYDTMVRMAQTWSLRYPLVDGQGNYG
SIDGDPPAAMRYTEARLRKIAEEMLADINKDTVDFQLNFDDSLEEPTVLPTRIPNLLVNG
TSGIAVGMATNMAPHNLSEVIDGTIAYIDNRDIEISELMTHVKGPDFPTGALIYGYNGVK
EAFETGRGRIVMRAKAEIETTKSGKEIIVVTEIPYQVNKSDMIKRTADLVQEKKIEGISE
IRDESSKDIRIIYEIKRDANANVVLNNLYKHTALQTSFSVNNIALVKGRPQMMNLKDMIH
EFVEHRHDVVIRRTKFELAEAEKRAHILEGYLIALDHLDEVIQLIRNSDTPEDARVGLME
RFGLTDIQARAILDMTLRRLTGLERDKIKEEYAELMKTIDYLKEVLADEGLRFKIIKDEL
IEVKEKYGDERRSQIVHSAEDLRMEDFIDDEEVVITISHNSYVKRTPLTEYRVQGRGGKG
AIGSTTRDEDFTEHIITASAHNYLLLFTEAGRCFWLRAFEIPEGSRTSKGRALQNIINIP
KDEKIKAYIKVTNLKDQEYLENNFIIMCTKKGTIKKTSLEAYSRPRANGINAININEGDQ
LLEATLTNGSSEIVMALRSGRAIRFNESTVRPMGRTATGVRGITLASEKDEVVGMISVDN
QETTVLVVSEKGYGKRTDIDDYRITNRGGKGVKTLNITDKTGDLVAIKGVTDENDLMIIN
KSGIVIRIGVESLRVMGRATQGVKLITLKGNDEIASVTKVDRQDEEEELEVEGAEGTENS
TENDSANTENEEQE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaaacagaaaacgaaaacaatttagttcctgctgaaaacaggattatcccc
atcaatatcgaagaccaaatgaaagccgcatacatcgattattcgatgtcggtaatcgtg
tctcgtgccctaccagacgcacgtgatggccttaaaccagtacacagacgtgtattgtac
ggtatgctagaccttggggtgacgagtggaaaaccctataaaaaatctgctcgtattgtt
ggagatgtactcggtaagtatcacccacatggtgactcatcagtatatgataccatggtt
cgtatggcccaaacttggtcattacgctatccccttgtcgatggacaaggtaactatggt
tcaattgatggtgacccaccagcagcaatgcgttatactgaagctcgactcagaaaaatt
gctgaggaaatgttggcagacattaataaagacactgttgacttccaattaaactttgat
gactcccttgaggaaccaaccgtattaccaactcgtatccctaacctattagtgaatggt
acatcaggtattgctgtaggtatggcgaccaacatggcgccacataatttgagcgaagta
atcgatggcacaatagcatacattgacaatagagatatcgaaatctctgaattaatgacc
catgttaaaggaccagacttccctacaggagcattaatatatggttataatggagtaaaa
gaagctttcgaaactggacgtggacgtattgttatgcgtgctaaagccgaaatcgaaact
acaaaatctggaaaagaaataatcgtagttacagaaataccttatcaagtaaataaatcg
gacatgatcaaaagaactgccgatttagtacaagaaaagaaaatcgaaggtatatctgaa
attagagatgaatcttcaaaagacatcagaattatctacgaaattaaacgtgatgcaaat
gcaaacgttgtccttaataatttatataaacatactgcccttcaaacatctttttcagta
aacaatattgctcttgtaaaaggtagaccacaaatgatgaacttaaaggatatgatccat
gagttcgttgaacatagacatgatgtggttatcagaagaacaaaattcgaacttgctgaa
gctgaaaaaagagcacatattttagaaggatatctcattgcattagatcacttagatgaa
gtcatacaactaatccgtaattccgatactccagaggatgctcgcgttggattaatggaa
cgttttggattaactgatattcaggcaagagctattctagacatgacccttagaaggtta
actggtctggaaagagacaagatcaaagaagaatatgctgagttaatgaaaacaatcgac
tacttaaaagaagtacttgctgatgaaggccttcgttttaagatcataaaagatgaactc
atcgaagttaaagaaaaatatggcgatgaaagacgttctcagattgtacactctgctgaa
gatcttcgtatggaagacttcattgatgatgaagaagtcgtaattactatatctcataat
agctatgtaaaacgtactcctttaaccgagtatcgtgttcaaggacgtggtggtaaagga
gctataggttctactactcgtgatgaagattttacagaacatatcatcactgcatcagca
cataattatctgttattattcacagaagctggaagatgtttctggttgagggcatttgaa
atcccagaaggtagccgaacttcgaaaggaagggcccttcaaaatatcatcaatatcccg
aaagatgaaaaaatcaaggcatatattaaggtaactaaccttaaagatcaagaatacctt
gaaaataatttcattatcatgtgtaccaagaaaggtacaattaagaaaacttcacttgaa
gcttattctagaccaagagccaatggtatcaacgcaatcaatattaatgaaggcgatcaa
ttattagaagctaccctaacaaatggttctagtgagatcgtaatggctcttcgttcaggt
cgtgcgattcgatttaatgaatcaaccgtaagaccaatgggaagaactgccactggtgtg
cgtggaattaccctagcaagcgaaaaagatgaggttgttggcatgattagtgttgataat
caagagacaactgtattggtagtttcggaaaaaggatacggaaaacgaactgatatagat
gactacagaatcactaaccgtggtggtaaaggagtaaaaaccttaaatattaccgataaa
actggtgatttagtagctatcaagggcgtaacagacgaaaatgacctgatgattatcaat
aaatcaggtatagttattcgtattggagttgaaagtttacgtgtgatgggtcgtgctact
caaggtgtaaaattaatcacgctaaaaggaaacgatgaaatcgcatctgtaactaaagtt
gatagacaagacgaagaagaagaattagaagttgaaggtgcggaaggcactgaaaactca
acagaaaatgattcagctaacacggagaatgaagaacaagaatag
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