Sphingobacterium daejeonense: NCTC13534_04189
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Entry
NCTC13534_04189 CDS
T06632
Symbol
valS
Name
(GenBank) Valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NCTC13534_04189 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdj01007
]
NCTC13534_04189 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdj03016
]
NCTC13534_04189 (valS)
Enzymes [BR:
sdj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
NCTC13534_04189 (valS)
Amino acid related enzymes [BR:
sdj01007
]
Aminoacyl-tRNA synthetase
Class I (U)
NCTC13534_04189 (valS)
Transfer RNA biogenesis [BR:
sdj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NCTC13534_04189 (valS)
Prokaryotic type
NCTC13534_04189 (valS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
Motif
Other DBs
NCBI-ProteinID:
VTQ03089
LinkDB
All DBs
Position
1:3470482..3473097
Genome browser
AA seq
871 aa
AA seq
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MSIAKTYSPKEAEEKWYSYWMDNGFFRSVPDEREPYTIVMPPPNVTGVLHMGHMLNNTIQ
DVLIRRARMQGKNACWVPGTDHASIATEAKVVAMLKEKGIEKTSISREEFLEYAWEWKEK
YGGIILKQLEKLGASCDWERTKFTMDPDLSEAVIDTFIKFYNEGYIYRGIRMVNWDPEGK
TALSDEEVIRKEVNQKLYYVRYKIKDSDEYVIIATTRPETIMADTAICINPLDDRYKHLQ
GKSVLVPLINREIPIIQDEYVEMEFGTGCLKVTPAHDLNDYELGQKHNLEVIDILNDNGT
LNEKAQILVGEDRFIARKKIANLLEEAGQIEKIEDYKSQVGFSERTNAAIEPKLSMQWFL
KMDKLSKPALEYVEDGTIKLIPDKFFASYKHWMENVKDWCISRQLWWGQRIPAWYNEKNE
WVIAKTEAEAIAELEKQGKSTNGIRQEDDVLDTWFSSGLWPMSVFDGVRNPENPDFKYYY
PTNDLVTAPEILFFWVARMIIMGHDYTHKPPFRNVYLTGIVRDKLGRKMSKSLGNSPDPI
ELMEQYGTDGVRVGMLLSSPAGNDLMFDVSYCEQGRNFANKIWNAFRLVKGWEVTENPAT
ESQKLAAKWFESKFNQALVEIEEHFANYRLSDALMATYKLIWDDFCSWYLELVKPAYQAP
IEKETLETVKALFQKVLKLAHPFMPFITEELWHDEIFGTRSEKDCIIVAEFPSIEKFDES
LIKEFATVQQIISEVRNIRNSKGISPKVALPLAINATNIDYSKYQESIVKLANIEELTFV
KEKVSGAVSFLAGKDECYIALENNIDVDAEKERISKEIEYLKGFLSSVDKKLSNERFVQN
AKPEIVENEKNKKADAEAKIQILQESLVSLG
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagcaaaaacgtacagtccgaaagaagctgaagagaaatggtattcatattgg
atggacaatggatttttccgttcggttccagatgaacgtgaaccttatactattgtaatg
ccacctccgaacgtcactggcgtgcttcatatgggccacatgttaaataacaccattcaa
gatgtgctgatccgccgtgctcgtatgcaaggtaaaaatgcttgttgggtaccaggaact
gaccatgcatcaattgctactgaagctaaggtcgtggcgatgttgaaggaaaaaggaatc
gaaaaaacttcaatctcgcgtgaagagttcttggagtatgcctgggaatggaaagaaaaa
tatggtggaattatcctcaaacaattggaaaaattgggcgcatcctgcgattgggaaaga
acaaaattcactatggatcccgacctttccgaagcagtaattgatacgttcattaaattc
tacaacgaaggttatatctaccgtggtatccgcatggttaactgggatcccgaaggtaaa
actgccctatcagatgaagaagtaatacgtaaagaagtaaatcaaaaactatattacgta
agatataaaatcaaagattcagacgagtatgtgattattgctactacccgacctgaaact
attatggccgatactgccatatgtatcaacccattggatgatcgttataagcatctgcaa
ggaaaatcggtattggtacctttaatcaacagggaaattccaattattcaagatgaatat
gttgagatggaatttggtactggctgtttgaaagttactcctgctcacgatttgaatgac
tatgagctaggtcaaaaacataatctggaggtgattgatatcctgaatgataatggaaca
ttaaatgaaaaagctcagatattagttggtgaagatcgtttcattgcacgtaagaaaatc
gctaacctccttgaagaagctggtcagatcgaaaaaatcgaagactacaaatctcaagtt
ggattctcggaacgtacaaatgcagcaattgaacctaaactatcaatgcaatggttcttg
aaaatggacaagctttcaaaacctgcattggaatatgttgaggatggaactattaagttg
ataccggataagttcttcgcttcttataagcactggatggagaatgtcaaagattggtgt
atctcacgtcaattatggtggggacagagaatcccagcttggtacaacgagaagaatgaa
tgggtaattgccaaaactgaagctgaagctattgctgaacttgaaaaacaaggtaaatct
acaaatggcattcgccaagaagacgacgtattggacacttggttctcatcagggttatgg
ccgatgtcggtttttgatggtgtaagaaacccagaaaaccctgatttcaaatattactac
cctaccaatgatctagtgactgcaccagagattcttttcttctgggttgcaaggatgatc
attatggggcatgattatacccataaaccacctttcagaaacgtatacctaactggaatt
gtacgcgataaattaggccgcaaaatgtctaagtcgctaggaaactcgccggacccaatt
gaactaatggaacaatatggaacagatggtgttcgtgtcggaatgttgttgtcatcacca
gcaggaaatgacctgatgtttgatgtttcttattgtgagcaaggaagaaatttcgccaat
aaaatctggaatgccttccgtttagtaaaaggttgggaagtaactgaaaatccagctaca
gaatctcaaaagttggcagcaaaatggttcgaaagtaaattcaaccaagcattggtggaa
atagaagaacattttgctaattatagattatctgatgccttgatggcaacatataaattg
atttgggatgatttctgctcttggtatttggaactggttaaacctgcttaccaagcacct
attgaaaaagaaactctagaaactgttaaagcgttatttcaaaaagttctgaaattagca
catccatttatgccatttatcactgaagaattatggcatgatgaaatcttcggaacacga
tctgaaaaagactgtattatcgtagctgaattcccttcaatcgaaaaattcgatgaaagc
ttgatcaaagaatttgctaccgttcaacagatcatctccgaagtaaggaacatcagaaat
tctaaaggaatttctccaaaagtggctcttcctctagctatcaatgctacaaatattgac
tatagcaaatatcaagaaagcattgtaaagcttgcaaacattgaagaattaacgtttgtc
aaagagaaagtttctggagctgtaagtttcttggctggaaaagatgaatgttatatcgca
ttggaaaacaatatagatgtggatgcagaaaaagaacgtatcagcaaggaaatagaatat
ctaaaaggcttcttatcatcagtagacaaaaaactgtctaatgaaagatttgttcagaat
gccaaacctgaaatcgtagaaaacgaaaaaaacaaaaaggcagatgctgaagcaaaaatt
cagatccttcaagaaagcttagttagtctaggctaa
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